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scnpilot_expt_750_bf_scaffold_132_23

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(23567..24553)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037BC9EB similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 328.0
  • Bit_score: 588
  • Evalue 3.60e-165
  • rbh
putative BUG-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 329.0
  • Bit_score: 557
  • Evalue 3.30e-156
Putative BUG-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU51116.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 329.0
  • Bit_score: 557
  • Evalue 1.60e-155

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGACACCCCCCACCCTTGCCTGGCGACGCGGCCTCCTGCTGCTGGCCGCTGCCGCCCTGGCGGCTTCCGCGCATGCAAACAACGCGAGCAACTGGCCGGCCAAGCCGATCAAGGTGATCGTCAACTTCCCGGCCGGCGGCGCCGCCGACCAGATAGCGCGGGCCATCTCGCAGCCGCTGCAGGAGTCGCTGAAGCAGCCGGTGGTGATCGAGAACCGCGCCGGCGCCAACGGCAACCTGGGCGGCGAAGTCGTGGCGCGCGCGCCGGCCGACGGCTACACCCTGCTGATGAGTTCCGGCGGCATGGTGTCGGTGAATCCGCACCTGTACTCGCGCATGAGCTTCGACCCCACGAAGGACCTGGTGCCTGTGGCGGCCGCCGCGCGCGTGCTGGTGTTCCTGGTCACGCGGCCTTCGCTGCCGCCGGCGAACGTGGGAGAGTTCATCTCGTACCTGAAGGCCAATCCCGGCAAGCTGACTTACGGCTCGCCGGGCAGCGGCAGCTCGCCGCACCTGGCGGGCGAGATGTTCAAGACCCAGGCCAACCTCTTCGCCTTGCACGTACCGTATCGCGGCGCCGCGCCTGCGCTGCAGGACCTGCTGGCCGGACAGATCGACTACACCTTCGACCCGGGCATCGCGCTCACGCAGGTGCGCGCGGGCAAGCTGCGCCTGCTGGCCGTGGGCAGCCCGAAGCGCTCGCCGCTCTTTCCCGACGTGCCGACACTCGACGAGGCCGGTTTGCGCGGCTTCGACGCGGACACGGTGTTCGGCTTCTACGCCCCGGCGGGCACGCCGCCGGAGGTGGTGGCGCAGCTCAATGCGCAGATCAATCGCACGCTCGCATTGCCGGCGGTGCAGGAACGCATCGCGGCACTCGGCGGCGAGCCGCAGCCCGGCTCGCCGGTGGCCTTCCAGCAGCGTGCGGCGGCGGATTCGCAGCGCTTCGGCGCGCTCATCCGCGAACGCAAGATCGTCGCGGACTGA
PROTEIN sequence
Length: 329
MTPPTLAWRRGLLLLAAAALAASAHANNASNWPAKPIKVIVNFPAGGAADQIARAISQPLQESLKQPVVIENRAGANGNLGGEVVARAPADGYTLLMSSGGMVSVNPHLYSRMSFDPTKDLVPVAAAARVLVFLVTRPSLPPANVGEFISYLKANPGKLTYGSPGSGSSPHLAGEMFKTQANLFALHVPYRGAAPALQDLLAGQIDYTFDPGIALTQVRAGKLRLLAVGSPKRSPLFPDVPTLDEAGLRGFDADTVFGFYAPAGTPPEVVAQLNAQINRTLALPAVQERIAALGGEPQPGSPVAFQQRAAADSQRFGALIRERKIVAD*