ggKbase home page

scnpilot_expt_750_bf_scaffold_161_2

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(1241..1867)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 202.0
  • Bit_score: 166
  • Evalue 7.90e-39
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35397.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 206.0
  • Bit_score: 387
  • Evalue 1.10e-104
id=4023762 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 196.0
  • Bit_score: 93
  • Evalue 2.30e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGCGTCTGCTGATCGACGTCGACGCGCTTTGCAAGCTGGCGCATTGGGGGCTTCTCGAGGAGATCCCATCGTTGATGGGTATCCCGCTGCAAGAGTGCACCACGCTCGCCTCGTCGAAATACCGGGCCATCAAGGCAAAGAGCAAGCTCGACGGGCGGGTGTTTCACGCAGTCGAAGCGGCCGACCGTGTGCTCGAAGCTATCGCCTTGATGCAGGCGCCGATGGAGCCCGCGAGCCAAAGCCTTGGGGATTTCGAAAACGTGTTGGGCATCGACGCTGGCGAGGCGGTGCTGCTCGCATCGCTCGTGGCAGCGCCGGATACACGGCTGCTGACGGGAGACAAGCGGGCGCTGCGCGCGCTCGCAGCGCTACCGCCTGAAGCACGTGAACCGTTTCTTGGCCGAGTAATCTGCGTGGAACGAATCATTGAGGCAGGGCTGAACCAGTGGGGGTTGGACGTGCTTCGATCCAAGGTGTGTCCTTGGAAGAAGATCGACGTTGCCGTGAACATCATCATGGGGAGTCGTTGCGACGCAGGAGAGGCCTCGGTCCGGGAGGCGCTCGCCTCTTACATCGGCGAGCTGACGTCGCTGTGCGATCCCTCGCTCATCTGCGAGAAGCTCTGA
PROTEIN sequence
Length: 209
VRLLIDVDALCKLAHWGLLEEIPSLMGIPLQECTTLASSKYRAIKAKSKLDGRVFHAVEAADRVLEAIALMQAPMEPASQSLGDFENVLGIDAGEAVLLASLVAAPDTRLLTGDKRALRALAALPPEAREPFLGRVICVERIIEAGLNQWGLDVLRSKVCPWKKIDVAVNIIMGSRCDAGEASVREALASYIGELTSLCDPSLICEKL*