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scnpilot_expt_750_bf_scaffold_161_8

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(6134..6877)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWS6_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 244.0
  • Bit_score: 409
  • Evalue 2.90e-111
  • rbh
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 244.0
  • Bit_score: 409
  • Evalue 8.30e-112
ABC transporter-related protein {ECO:0000313|EMBL:ACB36275.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain A similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 244.0
  • Bit_score: 409
  • Evalue 4.10e-111

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAACGCAATGATCGAAATCAACGACGTCTCCAAGTGGTACGGCCAGTTCGCGGTGCTCACGGATTGCAGCACCCATGTTCGTGAGGGCGAGGTGGTCGTGGTCTGCGGCCCTTCCGGCTCTGGCAAGTCCACGCTCATCAAGACGGTCAACGCACTTGAGCCCATTCAACGCGGCAGCATCACGGTCAATGGTATCCAGGTCTGCGATCCCAAGACCGATCTACCGAAGTTGCGCTCCCGGGTCGGCATGGTGTTCCAGCACTTCGAACTCTTCCCACACCTGAGCGTGATGGAGAACCTCGTACTGGCGCAAGTTCAGGTGCTCAAACGCTCGCATGCCGAAGCAGTCGAACGCGGGCTGCGCATGCTCGATCGTGTGGGCCTGTCGACTCACAAGGACAAGTTCCCGGGCCAGCTCTCCGGTGGCCAGCAACAGCGCGTTGCGATCGCGCGGGCGCTGTCGATGGACCCGATCGTCATGCTGTTCGACGAGCCGACCTCGGCGCTCGACCCGGAGATGGTGGGCGAGGTCCTCGACGTCATGGTGAAGCTCGCACGCGAAGGCATGACGATGATGGTGGTGACCCACGAGATGGGGTTCGCCAGGCAGGTCAGCGACCGGGTGATCTTCATGGACCAGGGGCGCATCGTTGAGGACTGCTCGAGTGACGAGTTCTTCGGGCGTCCCGAGAGCCGGGCACCGCGTGCACAGGACTTCCTCTCCAAGATCCTCGCGCACTGA
PROTEIN sequence
Length: 248
MNAMIEINDVSKWYGQFAVLTDCSTHVREGEVVVVCGPSGSGKSTLIKTVNALEPIQRGSITVNGIQVCDPKTDLPKLRSRVGMVFQHFELFPHLSVMENLVLAQVQVLKRSHAEAVERGLRMLDRVGLSTHKDKFPGQLSGGQQQRVAIARALSMDPIVMLFDEPTSALDPEMVGEVLDVMVKLAREGMTMMVVTHEMGFARQVSDRVIFMDQGRIVEDCSSDEFFGRPESRAPRAQDFLSKILAH*