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scnpilot_expt_750_bf_scaffold_161_9

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(6878..7567)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Variovorax sp. CF313 RepID=J2TMZ2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 229.0
  • Bit_score: 434
  • Evalue 7.90e-119
  • rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJL80012.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 229.0
  • Bit_score: 434
  • Evalue 1.10e-118
polar amino acid ABC transporter, inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 227.0
  • Bit_score: 333
  • Evalue 5.40e-89

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGGCTACGACTTCGATTGGGCCTCTCTCCAGCGTGCCTGGCCCTACCTGCTGCAGGGCCTGCAGATGACCGCCTTTCTGGTAGCCGCCTCCATGGCGGCCGGGATGGGCCTTGGCACCCTGCTGGCGATCACCCGCATCTTCGCGCCACGACCGGTGGCAGCCCTGGTGGCTGGGTATGTGAACCTGTTCCGCTCGATCCCGCTGATCCTCACGATCCTGTGGATCTATTTTCTGATGCCGGTGGTGCTGCGCAGCGTGACCGGGGATCCCAACCTCAGCGTCGGGCCGATCTATGCCGCGCTCGTGGCGTTCGTGCTCGCGGAGTCCGCCTACTACTGCGAGATCATCCGCGCCGGCATCGGCAGCGTGCGCGCAGGCCAGATGCAGGCAGCCCAGTCCTTGGGGATGTCGCCATGGCAGGCCATGCGACACGTGATCCTGCCGCAGGCGTTTCGCAATATGACGCCCTCGCTCATCAACCAGACCATCGCCCTGCTCAAGGACACCTCGCTGGTCTACGTGATCAGCCTGAACGACTTCCTCGGCGCCGCCAGCAAGGTGGGGCAACGCGACGGGCGCGTGGTCGAGGTCTACATCCTGGTCGCCGTCGTCTACCTGGTGCTGTGCACGGCAGGCGCCTGGTGGATCACCTGGCTGCAGCGGCGCAAGGCCGCAGCGGCGATCTGA
PROTEIN sequence
Length: 230
MGYDFDWASLQRAWPYLLQGLQMTAFLVAASMAAGMGLGTLLAITRIFAPRPVAALVAGYVNLFRSIPLILTILWIYFLMPVVLRSVTGDPNLSVGPIYAALVAFVLAESAYYCEIIRAGIGSVRAGQMQAAQSLGMSPWQAMRHVILPQAFRNMTPSLINQTIALLKDTSLVYVISLNDFLGAASKVGQRDGRVVEVYILVAVVYLVLCTAGAWWITWLQRRKAAAAI*