ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_161_14

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 11063..12001

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2TN17_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 310.0
  • Bit_score: 574
  • Evalue 6.70e-161
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL80017.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31 similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 310.0
  • Bit_score: 574
  • Evalue 9.30e-161
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 307.0
  • Bit_score: 352
  • Evalue 8.90e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGTTGCTCCGAGAGATCGAGGTGTTCCGTTCCGTGATGTCCGTAGGCTCCGCAAGCAAGGCGGCCGCGCTGCTGGGCGTCACGCAGCCCGCCATCAGCCAGTCTCTGCGCAGACTCGAGGAAGCGGCTGGATTCCCGTTGTTCCGCCGGCTGCGAGGCCGCCTGCAGCCCACGCCCGAAGCGCAAGCCCTGCTGGTCGAGGTCGAGCGTGTCTTCGTGGGTCTGAGCAGCATCGAGCACCGCATGCGCAGCCTCAAGCGCTTCGGCGTCAACACTCTGCGCATGGCGGTCTATCCGGCCTTCGGCCTGACCTTCGTCCCCCGCGTGCTGTCGCGGCTGGTGTCCGAGCGCCGCGATTCCGAAGACCGTCCCCAGATATCGCTGCAGGTGCTCAGTTCGCGGGAGGTGCACGAGGCCGTGCTGGGCCGCCAGGTCGACTTCGGATTGATGGCCGACGAAATGCCCACCACCGGCCTGGAGCATTCCGAGTTCGCACGCTTTCCGGGTGTGGTGGTGATGCATGCGAAGCACCGGCTGACCAAGGCCAGGACGATCCAGCCGCATCAACTCGCCGAAGAGCCCTTCCTCGCGCTCAACCCGGAAGATGCGTCCCGGCGACGCCTGGAGCGGGCTTTGGCGGAGTGCAACGTCGGGTTGAGCGTGCTGGTCGAGACGCCCTATGCGGCAAGCGTGTGCGAAATGGCCCTGAGCGGCATGGGCATCGGCTTTGTCAATCCGGTCACCGCCATGGAGTACGCCCAACGTGGCCTGGTCATCCGTCCACTGTCTCTGGAGGTCTCCTTCGCGGGGGTGCTGTTACTGCCCCCGGGACAGCCGCTGTCCGGCCTCGCCTCGCGAGTGCTTCAGCTCATGCGCATGCAGTTGGCCGAAGACCAGAAGGCCCTCGCGAATCTCCTCAAACCCCGCGCCAAAGCTTGA
PROTEIN sequence
Length: 313
MLLREIEVFRSVMSVGSASKAAALLGVTQPAISQSLRRLEEAAGFPLFRRLRGRLQPTPEAQALLVEVERVFVGLSSIEHRMRSLKRFGVNTLRMAVYPAFGLTFVPRVLSRLVSERRDSEDRPQISLQVLSSREVHEAVLGRQVDFGLMADEMPTTGLEHSEFARFPGVVVMHAKHRLTKARTIQPHQLAEEPFLALNPEDASRRRLERALAECNVGLSVLVETPYAASVCEMALSGMGIGFVNPVTAMEYAQRGLVIRPLSLEVSFAGVLLLPPGQPLSGLASRVLQLMRMQLAEDQKALANLLKPRAKA*