ggKbase home page

scnpilot_expt_750_bf_scaffold_161_30

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 25053..25736

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L499_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 225.0
  • Bit_score: 409
  • Evalue 2.10e-111
  • rbh
Heavy metal response regulator {ECO:0000313|EMBL:EJL80028.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 225.0
  • Bit_score: 409
  • Evalue 2.90e-111
winged helix family two component heavy metal response transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 223.0
  • Bit_score: 326
  • Evalue 8.50e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGCATACTGGTCATTGAAGACGAGCACAAGCTCGGCGACTACCTTGTTAAAGGCCTCACTGAGAGCGGCTTCGTGGTGGACTTGGCGCGCTCTGGTCTCGAGGGCCGCGCCCTGGCGCTCGACGGCGACTACGACTTGGTGGTACTCGACGTGATGCTGCCGGGAATCGACGGATTCGCCGTGCTGGAGGCCGTGCGCAAGATCAAATCCATGCCGGTGCTGATGCTCACGGCGCGCGACGAAGTGGCAGACCGCGTGCGCGGACTTCAAAGCGGTGCGGACGACTACCTTGCCAAGCCCTTCGCGTTCTCGGAGCTGCTCGCCCGGATCCAGGCACTGCTGCGCCGCGGCAAGCTGCACGAGGTGTCCAACTATGCGCTGAAGGATTTGCACCTCGACGTGGTCGCACGCAGGGCCTCCCGCAACGGGCAACGGCTTGACCTCACGGCCAAGGAGTTCGCACTGTTGACCTTGCTCATGCGCCGCCAGGGCAACGTGCTGTCGCGCACCCAGTTGGCCGAGCAGGTGTGGGACATCAATTTCGACAGCGACACCAACATCGTGGAAGTGGCCATCCGGCGGCTGCGCAGCAAGATCGACGATCCTTTCGAAGAGAAGCTGCTGCACACGGTACGCGGCATGGGATATGTGCTGGAGAGCCGGCAAGGCGGCATCCCGTGA
PROTEIN sequence
Length: 228
MRILVIEDEHKLGDYLVKGLTESGFVVDLARSGLEGRALALDGDYDLVVLDVMLPGIDGFAVLEAVRKIKSMPVLMLTARDEVADRVRGLQSGADDYLAKPFAFSELLARIQALLRRGKLHEVSNYALKDLHLDVVARRASRNGQRLDLTAKEFALLTLLMRRQGNVLSRTQLAEQVWDINFDSDTNIVEVAIRRLRSKIDDPFEEKLLHTVRGMGYVLESRQGGIP*