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scnpilot_expt_750_bf_scaffold_251_22

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(27009..29612)

Top 3 Functional Annotations

Value Algorithm Source
Pentapeptide repeat protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CUW0_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 878.0
  • Bit_score: 958
  • Evalue 5.90e-276
  • rbh
pentapeptide repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 878.0
  • Bit_score: 958
  • Evalue 1.70e-276
  • rbh
Pentapeptide repeat protein {ECO:0000313|EMBL:ACS20396.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 878.0
  • Bit_score: 958
  • Evalue 8.30e-276

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2604
ATGAAGATCGTCAAGCCCTTCCGACTGAGCGTGCTGACGCGGCCGCAGCGCTGGCGCGGCAACGACATGCTCGGTGTGGCGGTGCTGGCGCTGGCGAGCCTGGAAGACGAACCCAGGCTGATGCCCGAGCAGGAGCTCTGGCAGGCGGCGGCCGAGGACATCGGCCCGGGCAACATCCTCGACCTGGGCATGCCCAAGCACGAGCCCGAGTGGCTCGCCAGCGGCCATGCCTATACCGCCCACCAGGCCGACAAGACGATGTGCGCGGTGAAGATGGCCGTGGCGGGCAGCGAGAAGCGCCTGCACGTGTCGGGCGACCGCTACTGGCTCGACGGCCGCATCACGCCGCCCCAGCCCTTCGACAGCATGCCGCTCGACTGGGCGCATGCGTACGGCGGCGCGTCGGTGCCGCAGAACCCGCAGGGCATCGGCAGCGTCGACGAGCTCGTCAACGGCGTGCGCACGCGCCGGCTGCCGAACGTGGAGTCGCCCGACGCCCGCATGTCGGCGCCCGGGCGCGCCGTGCGGCCCGCGAGCCTGGGCGCGATCCCGCCCGACTGGCCGCAGCGCGCGCAGTTGCTCGGCAGCTCCTATGGCCAGCAATGGCTGCAGACGCAGTACCCCGGTCCCGCCGATGACATGGACTGGCGCTACTTCAACGCCGCGCCGCCCGAGCAGCGCTGGCCCGGCATGCAGGAACTGCCCGCCGGCGCGCCCTACGAGATCTGGAACATGCACCCGGACGAGCCGGTGCTGCAAGGCGCGCTGCCGCGCTGGCGCACGCGCTGCTTCGCGAGCTGGCAGGCCGACGGCAGCGAGCTGCGGGAAACGCCGCTGCGCCTGAGCACCGCGTGGTTCTTTCCGCATCGCCGGCGCGTGATCCTGATCTGGCACGGCAGCTTCGCGATTGCGGAAGACGACGCCGCCGACATGAAGCACATCATGCCGGCGCTCGAACTCGAGAACGAGCCGCGGCCGCACGCGCACTACCAGTCGGTGCTGCGGCTGCGGCTGGACCCGAAGTCCGCCGTCCATGCGGTGCGCGACAGCGACCTCGTGCCCAAGGCCGTCATGGGCGCCTGGGCGGGCGACCGGCTGCCGGACGCTTCCACCAAGCCGTCGGTGCGCAACCAGCGTGCCGGCCAGCTGCGCGCGCACGAACACGAGCGCGCCCGGCTGTTGGGCGAGGGGCTCGACCCCGACAAGCTGCTGCCGCAGCCGGTGAAGATCGAAGGCTCCTTCACGCTCGACGACCTGCCCGAGTACAGCGAGCGCATGGAAGCGGAGATCGCCCGCACGCGCGAGGACCTCAAGACGCGCACCGAGCAGGCCGTCGCCGCGTCGCGGCACGACGGCAGCTCGCCGCCCGGGGCGCCGCAGCGCAACCGCTTCGATCCCGACAAGGTGATCGCCGAACTCGCGCAGCTCGAGGCGTTCGGCGAACAGGCGCGACTGCTCCCGCCCGAAGCGCAGGCCGGTGCCCGGGCGGAAGCCGCGCAGGCGCGCGAACGCATGGCCGCGCAGATCCGCCAGGGGCACCTGTACACCGCGCACCTGCTCGACGCCGCGCCGCCCGCGTCGAGCTTTCGCACTGCCAAGCTGCGGCGCCGCCTGGGCCGCGCCGAAGCCGGCCAGCGCAACTTCGCGCGCATGAACCTGATCGGCGCCGACCTGTCGGACATGGACCTGAGCGGCGCCGACTTCACCGGCGCCAACCTCGAGGACGCCAACCTGCAGGGCGCGCGGCTCGCGGGCTGCAACTTTACGCAGGCGGTGCTGGCGCGCGCGCGGCTGGAGCGCGCGGTGCTTGCCGACTGCCGCTTCGACCACGCCAACCTGGGCGCGGCCCTGTGCGACGGCGCCGACTTCAGCCGCGCCAGCCTGCGCCATGCGAACTGCAGCAAGACCGTCTTCCGCGCCTGCGCCATGGGCTCGGCTGTGTTCGAGGCGACCCATGTGCACGAGAGCGTCTGGCAGCGGTGCGACCTGCGGCAGTCCCGCTGGCTGCAGGTAGCCATGATCAAGATGCGCTTCGAGGACGTGTCGTTCGAGGAAGCGTCGTTCCGCCAAATGGGCTGGATCGAGTGCGCGCTGGTTGGCGTGTCGTTCGCGCGCGCCACGCTCGAGGGCTGCGGCTTCACCAGGTTGGCCGGAAACGAAGGGCTGGACTTCACCGGCGCCACGCTGGTTTCGAGCAGCTTCGGGTACCACAGCTCGCTGGCCGGCGCGGTGCTGCGCGACGCGGTGCTCAGGCACTGCGGCCTGCGCGGCGTGACGCTGGCCGGGGCCGACCTGCGCGGCGTGCGGCTCGAAGGCTGCGACTTCTCCGGCTGCGACCTGCGCGGCGCGAAGCTAGATCGGCTGGTTGGCGGAGAGAGCCTCTTCATCCGCACCGACTTCACCGGCGCCTCGCTGGCGGGGGCGGATTTCATCGACAGCAACCTGTCGAAGTCCGACCTGCGGCTGGCCGACCTGCACGACGCCAACCTGTTCCGCGCCGACGTGTCGCAAGCCTTCATCGACGGCACGACACGCCTGGACGGCGCCTATACCCACCATGCCAAGGTGCTGCCCGCCCGGCGCGCCGGACCCGACGATCGATGA
PROTEIN sequence
Length: 868
MKIVKPFRLSVLTRPQRWRGNDMLGVAVLALASLEDEPRLMPEQELWQAAAEDIGPGNILDLGMPKHEPEWLASGHAYTAHQADKTMCAVKMAVAGSEKRLHVSGDRYWLDGRITPPQPFDSMPLDWAHAYGGASVPQNPQGIGSVDELVNGVRTRRLPNVESPDARMSAPGRAVRPASLGAIPPDWPQRAQLLGSSYGQQWLQTQYPGPADDMDWRYFNAAPPEQRWPGMQELPAGAPYEIWNMHPDEPVLQGALPRWRTRCFASWQADGSELRETPLRLSTAWFFPHRRRVILIWHGSFAIAEDDAADMKHIMPALELENEPRPHAHYQSVLRLRLDPKSAVHAVRDSDLVPKAVMGAWAGDRLPDASTKPSVRNQRAGQLRAHEHERARLLGEGLDPDKLLPQPVKIEGSFTLDDLPEYSERMEAEIARTREDLKTRTEQAVAASRHDGSSPPGAPQRNRFDPDKVIAELAQLEAFGEQARLLPPEAQAGARAEAAQARERMAAQIRQGHLYTAHLLDAAPPASSFRTAKLRRRLGRAEAGQRNFARMNLIGADLSDMDLSGADFTGANLEDANLQGARLAGCNFTQAVLARARLERAVLADCRFDHANLGAALCDGADFSRASLRHANCSKTVFRACAMGSAVFEATHVHESVWQRCDLRQSRWLQVAMIKMRFEDVSFEEASFRQMGWIECALVGVSFARATLEGCGFTRLAGNEGLDFTGATLVSSSFGYHSSLAGAVLRDAVLRHCGLRGVTLAGADLRGVRLEGCDFSGCDLRGAKLDRLVGGESLFIRTDFTGASLAGADFIDSNLSKSDLRLADLHDANLFRADVSQAFIDGTTRLDGAYTHHAKVLPARRAGPDDR*