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scnpilot_expt_750_bf_scaffold_42_19

Organism: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(13838..14113)

Top 3 Functional Annotations

Value Algorithm Source
Hypothetical membrane protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BAY5_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 92.0
  • Bit_score: 77
  • Evalue 5.80e-12
Membrane protein {ECO:0000313|EMBL:AJW79892.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 88.0
  • Bit_score: 79
  • Evalue 3.60e-12
hypothetical membrane protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 88.0
  • Bit_score: 77
  • Evalue 2.70e-12

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 276
GTGGCCCTCTCGTTGCGCAGCGTCGTCCCCGTCTGGGTCGCGGCGGCGCTCGGCGCGGTCGCCGTGCTCGTGTTCGCCCCCGCCGCTCCGCTGACCTGGATCCCGGTCGTCATGGCCGCCGCGCTGCTGCTGACGTTCACGATCCAGCTGAGCCTCGCGCGCAAGGAGGGGCTCGTCGAGCGGATCGTGGCGAGCCTCGCGGGCGCCCTCGGCATCCTCGTGCTCGCGACCGCCCTCAGCTGGGTCGTCGCGCCGCTCGTCACCGTCGGCGCCTGA
PROTEIN sequence
Length: 92
VALSLRSVVPVWVAAALGAVAVLVFAPAAPLTWIPVVMAAALLLTFTIQLSLARKEGLVERIVASLAGALGILVLATALSWVVAPLVTVGA*