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cg1_0.2_scaffold_2859_c

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_2859_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1281
DNA (1281bp) protein (427aa)
glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=CG_Rhodof_04
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) n=2 Tax=Bacteria RepID=Q21U21_RHOFD rbh
cg1_0.2_scaffold_2859_c_2
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1599..2009)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00035C7FBC rbh
PilT protein-like protein Tax=CG_Rhodof_01
PilT protein-like protein
cg1_0.2_scaffold_2859_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2022..2243)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000382074A rbh
AbrB family transcriptional regulator Tax=CG_Rhodof_04
AbrB family transcriptional regulator
cg1_0.2_scaffold_2859_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2376..3962
DNA (1587bp) protein (529aa)
RND family efflux transporter, MFP subunit n=1 Tax=Polaromonas sp. CF318 RepID=J2TUN9_9BURK rbh
secretion protein HlyD; K03585 membrane fusion protein Tax=CG_Rhodof_04
secretion protein HlyD
cg1_0.2_scaffold_2859_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4161..7316
DNA (3156bp) protein (1052aa)
hydrophobe/amphiphile efflux-1 (HAE1) family protein Tax=CG_Rhodof_04
hydrophobe/amphiphile efflux-1 (HAE1) family protein
cg1_0.2_scaffold_2859_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7309..8772
DNA (1464bp) protein (488aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRA6_POLNA rbh
RND efflux system outer membrane lipoprotein Tax=CG_Rhodof_04
RND efflux system outer membrane lipoprotein
cg1_0.2_scaffold_2859_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8807..9262
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B67B5F rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_2859_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9460..10377
DNA (918bp) protein (306aa)
Glycosyl transferase, family 3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UG0_RHOFD rbh
glycosyl transferase family protein Tax=CG_Rhodof_04
glycosyl transferase family protein
cg1_0.2_scaffold_2859_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10374..11246
DNA (873bp) protein (291aa)
uroporphyrin-III C-methyltransferase; K02303 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] Tax=CG_Rhodof_04
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF9_RHOFD rbh
uroporphyrin-III C-methyltransferase
cg1_0.2_scaffold_2859_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11396..11608
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS21_RHOFD rbh
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=CG_Rhodof_04
rpsU; 30S ribosomal protein S21
cg1_0.2_scaffold_2859_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11770..12216
DNA (447bp) protein (149aa)
GatB/Yqey n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UF6_RHOFD rbh
hypothetical protein; K09117 hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_2859_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12240..13547
DNA (1308bp) protein (436aa)
periplasmic protein Tax=CG_Rhodof_04
periplasmic protein
cg1_0.2_scaffold_2859_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14100..14720
DNA (621bp) protein (207aa)
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZW2_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_2859_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14755..16509
DNA (1755bp) protein (585aa)
Periplasmic sensor hybrid histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WU0_RHOFD
periplasmic sensor hybrid histidine kinase Tax=CG_Rhodof_04
periplasmic sensor hybrid histidine kinase
cg1_0.2_scaffold_2859_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16478..17083)
DNA (606bp) protein (202aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=CG_Rhodof_04
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AD6_POLSJ rbh
cg1_0.2_scaffold_2859_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17022..17438)
DNA (417bp) protein (139aa)
PilT domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1D7U0_9ZZZZ rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_2859_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17438..17692)
DNA (255bp) protein (85aa)
Prevent-host-death family protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZJ3_AROAE rbh
prevent-host-death family protein Tax=CG_Rhodof_04
prevent-host-death family protein
cg1_0.2_scaffold_2859_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17780..18364)
DNA (585bp) protein (195aa)
DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_Rhodof_04
DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y5Z5_9BURK
Displaying 18 items

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