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cg1_0.2_scaffold_4016_c

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4016_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..247)
-----------------
DNA (246bp)
protein (82aa)
2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WE5_RHOFD
putative glutamate synthase (NADPH) small subunit Tax=CG_Rhodof_04
putative glutamate synthase (NADPH) small subunit
cg1_0.2_scaffold_4016_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266..1255)
-----------------
DNA (990bp)
protein (330aa)
thiamine pyrophosphate enzyme-like protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=CG_Rhodof_04
Pyruvate ferredoxin oxidoreductase, beta subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WE4_RHOFD rbh
thiamine pyrophosphate enzyme-like protein
cg1_0.2_scaffold_4016_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1445..2698)
-----------------
DNA (1254bp)
protein (418aa)
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=CG_Rhodof_04
Pyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WE3_RHOFD rbh
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
cg1_0.2_scaffold_4016_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2691..3293)
-----------------
DNA (603bp)
protein (201aa)
Pyruvate ferredoxin oxidoreductase subunit gamma n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N8E6_9BURK rbh
porG; pyruvate ferredoxin oxidoreductase subunit gamma Tax=CG_Rhodof_04
porG; pyruvate ferredoxin oxidoreductase subunit gamma rbh
cg1_0.2_scaffold_4016_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3322..3450
-----------------
DNA (129bp)
protein (43aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_4016_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3604..4062
-----------------
DNA (459bp)
protein (153aa)
endoribonuclease L-PSP Tax=CG_Rhodof_04
endoribonuclease L-PSP
cg1_0.2_scaffold_4016_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4245..4784)
-----------------
DNA (540bp)
protein (180aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=CG_Rhodof_04
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CUP2_9BACT rbh
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
cg1_0.2_scaffold_4016_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4747..6351)
-----------------
DNA (1605bp)
protein (535aa)
poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=CG_Rhodof_04
Poly(A) polymerase I n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VH7_RHOFD rbh
poly(A) polymerase
cg1_0.2_scaffold_4016_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6344..7036)
-----------------
DNA (693bp)
protein (231aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002D62C55 rbh
HAD family hydrolase Tax=CG_Rhodof_04
HAD family hydrolase
cg1_0.2_scaffold_4016_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7051..7740)
-----------------
DNA (690bp)
protein (230aa)
DnaA regulatory inactivator Hda n=1 Tax=Curvibacter lanceolatus RepID=UPI00037A2C8E rbh
chromosomal replication initiator DnaA; K10763 DnaA-homolog protein Tax=CG_Rhodof_04
chromosomal replication initiator DnaA
cg1_0.2_scaffold_4016_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7737..8813)
-----------------
DNA (1077bp)
protein (359aa)
Putative permease n=1 Tax=Polaromonas sp. CF318 RepID=J2L835_9BURK rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_4016_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9015..9326
-----------------
DNA (312bp)
protein (104aa)
Post-segregation antitoxin (Ccd killing mechanism protein) encoded by the F plasmid n=1 Tax=Polaromonas sp. CF318 RepID=J3D8S1_9BURK rbh
post-segregation antitoxin Tax=CG_Rhodof_04
post-segregation antitoxin
cg1_0.2_scaffold_4016_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9268..9627
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002EDF425 rbh
CcdB-like protein toxin protein Tax=CG_Rhodof_04
CcdB-like protein toxin protein
cg1_0.2_scaffold_4016_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9630..10457
-----------------
DNA (828bp)
protein (276aa)
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] Tax=CG_Rhodof_04
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=TYSY_RHOFD rbh
cg1_0.2_scaffold_4016_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10421..11347
-----------------
DNA (927bp)
protein (309aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWC7_9BURK rbh
hypothetical protein Tax=CG_Rhodof_04
permease of the drug/metabolite transporter DMT superfamily
cg1_0.2_scaffold_4016_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11362..11856
-----------------
DNA (495bp)
protein (165aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=CG_Rhodof_04
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U57_RHOFD rbh
cg1_0.2_scaffold_4016_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11916..12725
-----------------
DNA (810bp)
protein (270aa)
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=CG_Rhodof_04
Exodeoxyribonuclease III n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U59_RHOFD rbh
exodeoxyribonuclease III
cg1_0.2_scaffold_4016_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12896..13558
-----------------
DNA (663bp)
protein (221aa)
Transcriptional regulator, TetR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V88_RHOFD rbh
TetR family transcriptional regulator; K09017 TetR/AcrR family transcriptional regulator Tax=CG_Rhodof_04
TetR family transcriptional regulator
cg1_0.2_scaffold_4016_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14086..14823
-----------------
DNA (738bp)
protein (246aa)
Secretion protein HlyD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V87_RHOFD rbh
secretion protein HlyD Tax=CG_Rhodof_04
secretion protein HlyD
cg1_0.2_scaffold_4016_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14834..18022
-----------------
DNA (3189bp)
protein (1063aa)
Nodulation protein nolG n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YH17_9BURK rbh
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CG_Rhodof_04
acriflavin resistance protein
cg1_0.2_scaffold_4016_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18087..18194
-----------------
DNA (108bp)
protein (36aa)
transposase; K07484 transposase Tax=CG_Rhodof_04
Displaying 21 items

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