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cg1_0.2_scaffold_171_c

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_171_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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127..1833
-----------------
DNA (1707bp)
protein (569aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003734E16 rbh
transposase IS4 family protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_171_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2016..2264
-----------------
DNA (249bp)
protein (83aa)
HicA family toxin-antitoxin system, toxin component n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DTR1_THIND rbh
HicA family toxin-antitoxin system, toxin component Tax=CG_Rhodof_04
HicA family toxin-antitoxin system, toxin component
cg1_0.2_scaffold_171_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2261..2584
-----------------
DNA (324bp)
protein (108aa)
Putative HicB family protein n=1 Tax=mine drainage metagenome RepID=E6PLN1_9ZZZZ rbh
putative HicB family protein Tax=CG_Rhodof_04
putative HicB family protein
cg1_0.2_scaffold_171_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3052..3348
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVQ0_ACCPU rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_171_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3352..3864
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVP9_ACCPU rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_171_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3935..5095)
-----------------
DNA (1161bp)
protein (387aa)
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=CG_Rhodof_04
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2K1_ACIDE rbh
cg1_0.2_scaffold_171_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5141..5548)
-----------------
DNA (408bp)
protein (136aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=CG_Rhodof_04
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
4''''-phosphopantetheinyl transferase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DC9180 rbh
cg1_0.2_scaffold_171_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5572..6348)
-----------------
DNA (777bp)
protein (259aa)
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=CG_Rhodof_04
Pyridoxine 5'-phosphate synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PDXJ_RHOFD rbh
pyridoxine 5'-phosphate synthase
cg1_0.2_scaffold_171_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6407..7156)
-----------------
DNA (750bp)
protein (250aa)
DNA repair protein RecO n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RECO_RHOFD rbh
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=CG_Rhodof_04
DNA repair protein RecO
cg1_0.2_scaffold_171_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7177..7476)
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VU19_POLNA rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_171_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7546..8577)
-----------------
DNA (1032bp)
protein (344aa)
GTPase Era n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSF6_VARPS rbh
GTP-binding protein Era; K03595 GTP-binding protein Era Tax=CG_Rhodof_04
GTP-binding protein Era
cg1_0.2_scaffold_171_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8574..9260)
-----------------
DNA (687bp)
protein (229aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=CG_Rhodof_04
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9K9_9BURK rbh
cg1_0.2_scaffold_171_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9282..9635)
-----------------
DNA (354bp)
protein (118aa)
Putative transmembrane protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN2_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_171_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9649..10614)
-----------------
DNA (966bp)
protein (322aa)
peptidase S26A, signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=CG_Rhodof_04
peptidase S26A, signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN3_RHOFD rbh
cg1_0.2_scaffold_171_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10614..12425)
-----------------
DNA (1812bp)
protein (604aa)
Elongation factor 4 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=LEPA_RHOFD rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=CG_Rhodof_04
GTP-binding protein LepA
cg1_0.2_scaffold_171_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12581..14038)
-----------------
DNA (1458bp)
protein (486aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] Tax=CG_Rhodof_04
Peptidase S1C, Do n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN5_RHOFD rbh
peptidase S1C, Do
cg1_0.2_scaffold_171_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14078..15073)
-----------------
DNA (996bp)
protein (332aa)
Putative sigma E regulatory protein, MucB/RseB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN6_RHOFD rbh
putative sigma E regulatory protein, MucB/RseB; K03598 sigma-E factor negative regulatory protein RseB Tax=CG_Rhodof_04
putative sigma E regulatory protein, MucB/RseB
cg1_0.2_scaffold_171_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15070..15687)
-----------------
DNA (618bp)
protein (206aa)
Sigma-E factor negative regulatory protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5R6_RAMTT rbh
Sigma-E factor negative regulatory protein; K03597 sigma-E factor negative regulatory protein RseA Tax=CG_Rhodof_04
Sigma-E factor negative regulatory protein
cg1_0.2_scaffold_171_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15790..16422)
-----------------
DNA (633bp)
protein (211aa)
RNA polymerase sigma factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2I9_ACIDE rbh
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Rhodof_04
ECF subfamily RNA polymerase sigma-24 factor
cg1_0.2_scaffold_171_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16419..16874)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_171_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16908..18155)
-----------------
DNA (1248bp)
protein (416aa)
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=CG_Rhodof_04
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XP0_RHOFD rbh
beta-ketoacyl synthase
cg1_0.2_scaffold_171_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18295..18534)
-----------------
DNA (240bp)
protein (80aa)
Acyl carrier protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5S0_RAMTT rbh
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=CG_Rhodof_04
acpP; acyl carrier protein
cg1_0.2_scaffold_171_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18621..19370)
-----------------
DNA (750bp)
protein (250aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=CG_Rhodof_04
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Polaromonas sp. CF318 RepID=J2TJE4_9BURK rbh
3-oxoacyl-(acyl-carrier-protein) reductase
cg1_0.2_scaffold_171_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19374..20330)
-----------------
DNA (957bp)
protein (319aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=CG_Rhodof_04
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9J8_9BURK rbh
malonyl CoA-acyl carrier protein transacylase
cg1_0.2_scaffold_171_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20395..21372)
-----------------
DNA (978bp)
protein (326aa)
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=CG_Rhodof_04
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9J7_9BURK rbh
cg1_0.2_scaffold_171_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21376..22425)
-----------------
DNA (1050bp)
protein (350aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=CG_Rhodof_04
Phosphate acyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PLSX_RHOFD rbh
putative glycerol-3-phosphate acyltransferase PlsX
cg1_0.2_scaffold_171_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22533..22715)
-----------------
DNA (183bp)
protein (61aa)
50S ribosomal protein L32 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9J5_9BURK rbh
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=CG_Rhodof_04
rpmF; 50S ribosomal protein L32
cg1_0.2_scaffold_171_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22842..23378)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XP7_RHOFD rbh
hypothetical protein; K07040 uncharacterized protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_171_c_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23407..24006
-----------------
DNA (600bp)
protein (200aa)
septum formation protein Maf n=1 Tax=Curvibacter lanceolatus RepID=UPI00037357FB rbh
yceF; Maf, Nucleotide binding protein; K06287 septum formation protein Tax=CG_Rhodof_04
yceF; Maf, Nucleotide binding protein
cg1_0.2_scaffold_171_c_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24003..24782
-----------------
DNA (780bp)
protein (260aa)
uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=CG_Rhodof_04
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2L5_VARPE rbh
uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase
Displaying items 1-30 of 103 in total

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