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ACD29_35

Alias: ACD29_441825.17593.6

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
ACD29_35_1

Not on your lists

1..1065
-----------------
DNA (1065bp)
protein (355aa)
1..1065 + (rbs_motif=None rbs_spacer=None)
ACD29_35_2

Not on your lists

1084..2910
-----------------
DNA (1827bp)
protein (609aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G470_HERAR (db=UNIREF evalue=2.0e-58 bit_score=230.0 identity=28.36 coverage=94.9096880131363)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=111)
ACD29_35_3

Not on your lists

2912..3829
-----------------
DNA (918bp)
protein (306aa)
oxidoreductase domain-containing protein
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=180 evalue=1.2e-16)
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (db=superfamily db_id=SSF55347 from=110 to=302 evalue=5.5e-12)
GFO_IDH_MocA (db=HMMPfam db_id=PF01408 from=2 to=93 evalue=6.3e-07 interpro_id=IPR000683 interpro_description=Oxidoreductase, N-terminal GO=Molecular Function: oxidoreductase activity (GO:0016491))
ACD29_35_4
R_Gammaproteobacteria_36_30, Gammaproteobacteria, Proteobacteria, Bacteria

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3826..4389
-----------------
DNA (564bp)
protein (188aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
seg (db=Seg db_id=seg from=170 to=180)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=174 evalue=4.8e-35)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=170 evalue=3.9e-25)
ACD29_35_5

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4386..4559
-----------------
DNA (174bp)
protein (58aa)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=54 evalue=1.8e-06)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=55 evalue=8.6e-06)
CMP-N-acetylneuraminic acid synthetase n=1 Tax=Brevibacillus sp. BC25 RepID=J3AFU1_9BACL
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
ACD29_35_6

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4867..5457
-----------------
DNA (591bp)
protein (197aa)
short-chain dehydrogenase/reductase (EC:1.1.1.-)
3-OXOACYL-(ACYL CARRIER PROTEIN) REDUCTASE-RELATED (db=HMMPanther db_id=PTHR19410:SF85 from=1 to=191 evalue=3.1e-55)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=1 to=191 evalue=3.1e-55 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=196 evalue=3.4e-46)
ACD29_35_7
R_Gammaproteobacteria_36_30, Gammaproteobacteria, Proteobacteria, Bacteria

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5479..6099
-----------------
DNA (621bp)
protein (207aa)
seg (db=Seg db_id=seg from=179 to=190)
seg (db=Seg db_id=seg from=123 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD29_35_8

Not on your lists

6077..6859
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein
Uncharacterized protein n=8 Tax=Leptospira interrogans RepID=J5DPC6_LEPIR
ACD29_35_9
R_Gammaproteobacteria_36_30, Gammaproteobacteria, Proteobacteria, Bacteria

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6852..7721
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein
seg (db=Seg db_id=seg from=234 to=262)
seg (db=Seg db_id=seg from=7 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=254 to=276)
ACD29_35_10

Not on your lists

7766..8161
-----------------
DNA (396bp)
protein (132aa)
7766..8161 + (rbs_motif=None rbs_spacer=None)
ACD29_35_11

Not on your lists

comp(8173..9267)
-----------------
DNA (1095bp)
protein (365aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07RG3_RHOP5 (db=UNIREF evalue=4.0e-94 bit_score=348.0 identity=46.98 coverage=98.6301369863014)
DegT/DnrJ/EryC1/StrS aminotransferase
DegT_DnrJ_EryC1 (db=HMMPfam db_id=PF01041 from=16 to=358 evalue=4.8e-102 interpro_id=IPR000653 interpro_description=DegT/DnrJ/EryC1/StrS aminotransferase)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=17 to=362 evalue=1.0e-101 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
ACD29_35_12

Not on your lists

comp(9292..9789)
-----------------
DNA (498bp)
protein (166aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2WB95_MAGSA (db=UNIREF evalue=1.0e-30 bit_score=134.0 identity=40.91 coverage=91.566265060241)
hypothetical protein
ACD29_35_13

Not on your lists

comp(9802..11082)
-----------------
DNA (1281bp)
protein (427aa)
C-methyltransferase
seg (db=Seg db_id=seg from=316 to=337)
Methyltransf_14 (db=HMMPfam db_id=PF08484 from=244 to=407 evalue=1.7e-35 interpro_id=IPR013691 interpro_description=C-methyltransferase)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=80 to=266 evalue=1.1e-18)
ACD29_35_14
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11166..12188)
-----------------
DNA (1023bp)
protein (341aa)
Oxidoreductase, N-terminal n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4BX27_CROWT (db=UNIREF evalue=3.0e-82 bit_score=308.0 identity=45.48 coverage=93.5483870967742)
hypothetical protein
seg (db=Seg db_id=seg from=322 to=333)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=5 to=168 evalue=6.9e-35)
ACD29_35_15

Not on your lists

12445..14001
-----------------
DNA (1557bp)
protein (519aa)
cytidyltransferase
cytidyltransferase
Cytidyltransferase-related domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXS3_DESAD (db=UNIREF evalue=8.0e-113 bit_score=411.0 identity=43.64 coverage=94.4123314065511)
seg (db=Seg db_id=seg from=12 to=22)
ACD29_35_16

Not on your lists

14772..15062
-----------------
DNA (291bp)
protein (97aa)
NAD-dependent epimerase/dehydratase
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=1 to=83 evalue=5.1e-12)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=2 to=83 evalue=2.6e-09)
nucleoside-diphosphate-sugar epimerase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002880689
ACD29_35_17

Not on your lists

15885..16271
-----------------
DNA (387bp)
protein (129aa)
Putative aminotransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUF3_9BRAD (db=UNIREF evalue=7.0e-33 bit_score=142.0 identity=56.3 coverage=90.6976744186046)
putative aminotransferase
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=1 to=123 evalue=3.4e-21 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
DegT_DnrJ_EryC1 (db=HMMPfam db_id=PF01041 from=1 to=123 evalue=1.4e-15 interpro_id=IPR000653 interpro_description=DegT/DnrJ/EryC1/StrS aminotransferase)
ACD29_35_18

Not on your lists

16258..17463
-----------------
DNA (1206bp)
protein (402aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Geobacillus thermoglucosidasius C56-YS93 RepID=D4Y8R6_BACTR (db=UNIREF evalue=5.0e-122 bit_score=441.0 identity=57.29 coverage=95.273631840796)
UDP-N-acetyl-D-glucosamine 2-epimerase
UDP-N-acetyl-D-glucosamine 2-epimerase
NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epi (db=HMMTigr db_id=TIGR03568 from=5 to=371 evalue=2.0e-193 interpro_id=IPR020004 interpro_description=UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing)
ACD29_35_19

Not on your lists

17432..17626
-----------------
DNA (195bp)
protein (65aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
N-ACETYLNEURAMINATE SYNTHETASE (db=HMMPanther db_id=PTHR23416:SF1 from=1 to=63 evalue=3.2e-16)
SIALIC ACID SYNTHASE-RELATED (db=HMMPanther db_id=PTHR23416 from=1 to=63 evalue=3.2e-16)
Aldolase (db=superfamily db_id=SSF51569 from=3 to=50 evalue=6.9e-15)
Displaying 19 items

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