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cg2_3.0_scaffold_456_c_15

Organism: CG2_30_FULL_Comamonadaceae_59_20_curated

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38 MC: 1
Location: 13320..13991

Top 3 Functional Annotations

Value Algorithm Source
Putative ecf-family RNA polymerase sigma factor transcription regulator protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK25_METPP similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 179.0
  • Bit_score: 154
  • Evalue 1.50e-34
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Rhodof_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 458
  • Evalue 7.00e-126
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 179.0
  • Bit_score: 154
  • Evalue 4.30e-35

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Taxonomy

CG_Rhodof_02 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGTTCGGAAATCTGCCATACCCGGCCATGTCGAATTTTCAAAGTGCGTCCATGAATAACCAGACCGAATCCATTGCATTGCCAACGTCAGCCACTCATCCCGACACATCCGGGGCCTTGTGGGTCCGGCTTCGGCAACGCCTGCTTCGCCATGCCAGAATGATGGTGTTCGAGCCCGCGTTGGCGGAAGACCTGGTTCAGGAATCGCTGGTGGCGGTTCTGGAAAAGCCCGAAGCCCATCGCGGCGAGGCCTCCCTGATGACCTGGGCCGTCGCCATCCTCAAGCACAAAATTGCCGACTGGTACCGCTCACCTCACCAGCGGCGGCGCAGTTGGGTCGAGACTGATGGCGATGATGCGGACGCCGACCCAACCGAGGGACTTTACGACGAGCAAGGCAGTTACAAGGAAGTTGTGCCGTCCTGGCAGCAGCCCGAAAAGCAGGAGACCCAGCGCCAGATGATGTCCGTCATGGAGGCCTGTCTGAAGCGCCTACCCTCACAAACCGGCAGGGTGTTTATGATGCGCGAATGGTTAGGTTTTGAAACAACTGAGATATGTGAACGCCTGAGCCTGAGTGCCGAAAACTGCCGCATGATTTTGCACCGGGCGCGCATGGGCTTGCGTCAATGCATGATGAGCCAGGGACACACCACAGGGGGACTTCAATGA
PROTEIN sequence
Length: 224
MFGNLPYPAMSNFQSASMNNQTESIALPTSATHPDTSGALWVRLRQRLLRHARMMVFEPALAEDLVQESLVAVLEKPEAHRGEASLMTWAVAILKHKIADWYRSPHQRRRSWVETDGDDADADPTEGLYDEQGSYKEVVPSWQQPEKQETQRQMMSVMEACLKRLPSQTGRVFMMREWLGFETTEICERLSLSAENCRMILHRARMGLRQCMMSQGHTTGGLQ*