ggKbase home page

CG2_30_FULL_Comamonadaceae_59_20_curated

CG2_30_FULL_CG_Rhodof_02_59_1
In projects: CG2_30_FULL_binning  |  CG2_30_FULL  |  CG_2014_505_non-redundant_genomes

Consensus taxonomy: CG_Rhodof_02  →  Rhodoferax  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 187 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cg2_3.0_scaffold_148_c
Species: CG_Rhodof_02 (97.73%)
88 80190 bp 60.29 1.00 92.63
cg2_3.0_scaffold_59_c
Species: CG_Rhodof_02 (98.82%)
85 89627 bp 58.94 1.00 93.31
cg2_3.0_scaffold_86_c
Species: CG_Rhodof_02 (97.65%)
85 79085 bp 59.55 1.00 92.22
cg2_3.0_scaffold_109_c
Species: CG_Rhodof_02 (98.65%)
74 72327 bp 60.47 1.00 92.22
cg2_3.0_scaffold_123_c
Species: CG_Rhodof_02 (97.3%)
74 74590 bp 61.34 1.00 93.87
cg2_3.0_scaffold_194_c
Species: CG_Rhodof_02 (95.45%)
66 56972 bp 60.02 1.00 87.44
cg2_3.0_scaffold_284_c
Species: CG_Rhodof_02 (90.48%)
63 56284 bp 58.31 1.00 93.25
cg2_3.0_scaffold_233_c
Species: CG_Rhodof_02 (100%)
62 58137 bp 58.38 1.00 94.81
cg2_3.0_scaffold_139_c
Species: CG_Rhodof_02 (96.72%)
61 66346 bp 60.98 1.00 93.21
cg2_3.0_scaffold_132_c
Species: CG_Rhodof_02 (95%)
60 65607 bp 61.00 1.00 96.85
cg2_3.0_scaffold_456_c
Species: CG_Rhodof_02 (97.83%)
46 39716 bp 57.52 1.00 88.74
cg2_3.0_scaffold_1927_c
Species: CG_Rhodof_02 (100%)
44 38048 bp 57.23 1.00 90.48
cg2_3.0_scaffold_669_c
Species: CG_Rhodof_02 (93.02%)
43 46103 bp 59.01 1.00 94.02
cg2_3.0_scaffold_336_c
Species: CG_Rhodof_02 (95.35%)
43 44965 bp 59.63 1.00 92.23
cg2_3.0_scaffold_500_c
Species: CG_Rhodof_02 (97.62%)
42 45636 bp 60.22 1.00 92.74
cg2_3.0_scaffold_385_c
Species: CG_Rhodof_02 (97.56%)
41 42192 bp 60.80 1.00 94.13
cg2_3.0_scaffold_601_c
Species: CG_Rhodof_02 (95%)
40 41373 bp 60.18 1.00 93.57
cg2_3.0_scaffold_694_c
Species: CG_Rhodof_02 (97.44%)
39 33356 bp 59.18 1.00 89.17
cg2_3.0_scaffold_744_c
Species: CG_Rhodof_02 (89.47%)
38 32604 bp 60.33 1.00 91.42
cg2_3.0_scaffold_659_c
Species: CG_Rhodof_02 (94.74%)
38 33873 bp 59.13 1.00 94.54
cg2_3.0_scaffold_692_c
Species: CG_Rhodof_02 (97.3%)
37 33482 bp 60.22 1.00 90.92
cg2_3.0_scaffold_5485_c
Species: CG_Rhodof_02 (94.59%)
37 19458 bp 55.83 1.00 77.23
cg2_3.0_scaffold_772_c
Species: CG_Rhodof_02 (94.59%)
37 36478 bp 61.84 1.00 90.84
cg2_3.0_scaffold_564_c
Species: CG_Rhodof_02 (97.22%)
36 36132 bp 57.56 1.00 93.28
cg2_3.0_scaffold_676_c
Species: CG_Rhodof_02 (97.14%)
35 33741 bp 56.61 1.00 93.34
cg2_3.0_scaffold_810_c
Species: CG_Rhodof_02 (97.06%)
34 32897 bp 58.23 1.00 92.68
cg2_3.0_scaffold_631_c
Species: CG_Rhodof_02 (94.12%)
34 34384 bp 59.78 1.00 90.91
cg2_3.0_scaffold_689_c
Species: CG_Rhodof_02 (97.06%)
34 33520 bp 59.18 1.00 92.81
cg2_3.0_scaffold_678_c
Species: CG_Rhodof_02 (96.97%)
33 33880 bp 59.27 1.00 93.75
cg2_3.0_scaffold_768_c
Species: CG_Rhodof_02 (96.88%)
32 32276 bp 60.36 1.00 95.63
cg2_3.0_scaffold_684_c
Species: CG_Rhodof_02 (100%)
32 33992 bp 59.61 1.00 90.44
cg2_3.0_scaffold_590_c
Species: CG_Rhodof_02 (93.75%)
32 35666 bp 59.12 1.00 91.41
cg2_3.0_scaffold_1000_c
Species: CG_Rhodof_02 (100%)
31 28480 bp 60.75 1.00 90.71
cg2_3.0_scaffold_1334_c
Species: CG_Rhodof_02 (100%)
31 27737 bp 60.57 1.00 94.39
cg2_3.0_scaffold_1642_c
Species: CG_Rhodof_02 (90%)
30 22828 bp 56.17 1.00 92.56
cg2_3.0_scaffold_1293_c
Species: CG_Rhodof_02 (100%)
29 25454 bp 60.12 1.00 95.34
cg2_3.0_scaffold_1311_c
Species: CG_Rhodof_02 (92.86%)
28 25492 bp 60.45 1.00 93.17
cg2_3.0_scaffold_862_c
Species: CG_Rhodof_02 (100%)
28 30514 bp 61.49 1.00 95.04
cg2_3.0_scaffold_3797_c
Species: CG_Rhodof_02 (96.43%)
28 27069 bp 60.02 1.00 90.28
cg2_3.0_scaffold_2281_c
Species: CG_Rhodof_02 (92.59%)
27 24845 bp 60.75 1.00 90.07
cg2_3.0_scaffold_1143_c
Species: CG_Rhodof_02 (96.15%)
26 27102 bp 61.44 1.00 92.84
cg2_3.0_scaffold_1371_c
Species: CG_Rhodof_02 (100%)
26 24701 bp 61.16 1.00 95.56
cg2_3.0_scaffold_1389_c
Species: CG_Rhodof_02 (96.15%)
26 24771 bp 58.69 1.00 95.45
cg2_3.0_scaffold_1358_c
Species: CG_Rhodof_02 (92.31%)
26 24813 bp 59.52 1.00 93.79
cg2_3.0_scaffold_1687_c
Species: CG_Rhodof_02 (84.62%)
26 22399 bp 59.01 1.00 91.64
cg2_3.0_scaffold_996_c
Species: CG_Rhodof_02 (100%)
25 28344 bp 60.27 1.00 89.30
cg2_3.0_scaffold_1704_c
Species: CG_Rhodof_02 (100%)
25 22110 bp 56.97 1.00 91.64
cg2_3.0_scaffold_1714_c
Species: CG_Rhodof_02 (100%)
25 28545 bp 61.33 1.00 94.89
cg2_3.0_scaffold_1236_c
Species: CG_Rhodof_02 (100%)
25 26163 bp 61.44 1.00 92.95
cg2_3.0_scaffold_2304_c
Species: CG_Rhodof_02 (91.67%)
24 19119 bp 60.53 1.00 87.49
Displaying items 1-50 of 187 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.