ggKbase home page

cg2_3.0_scaffold_1371_c

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1371_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98..1063)
DNA (966bp) protein (322aa)
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] Tax=CG_Rhodof_02
Pseudouridine synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X82_RHOFD rbh
pseudouridine synthase
cg2_3.0_scaffold_1371_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1029..1889)
DNA (861bp) protein (287aa)
hypothetical protein; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] Tax=CG_Rhodof_02
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=TRMB_RHOFD rbh
hypothetical protein
cg2_3.0_scaffold_1371_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1859..2746)
DNA (888bp) protein (296aa)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Polaromonas sp. CF318 RepID=J2L5R1_9BURK rbh
glutamate--tRNA ligase Tax=CG_Rhodof_02
glutamate--tRNA ligase
cg2_3.0_scaffold_1371_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2755..3810)
DNA (1056bp) protein (352aa)
UDP-galactopyranose mutase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X71_RHOFD rbh
FAD dependent oxidoreductase; K06955 Tax=CG_Rhodof_02
FAD dependent oxidoreductase
cg2_3.0_scaffold_1371_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4107..4808
DNA (702bp) protein (234aa)
Pirin-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VB1_RHOFD rbh
Pirin-like protein; K06911 Tax=CG_Rhodof_02
Pirin-like protein
cg2_3.0_scaffold_1371_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4832..5386
DNA (555bp) protein (185aa)
Putative flavodoxin n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VB3_RHOFD rbh
putative flavodoxin Tax=CG_Rhodof_02
putative flavodoxin
cg2_3.0_scaffold_1371_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5421..6191
DNA (771bp) protein (257aa)
RNA methyltransferase TrmH; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=CG_Rhodof_02
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W99_RHOFD rbh
RNA methyltransferase TrmH
cg2_3.0_scaffold_1371_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6198..6749)
DNA (552bp) protein (184aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Rhodof_02
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V09_RHOFD rbh
cg2_3.0_scaffold_1371_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6852..7724)
DNA (873bp) protein (291aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=CG_Rhodof_02
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V10_RHOFD rbh
glucose-1-phosphate thymidylyltransferase
cg2_3.0_scaffold_1371_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7742..8656)
DNA (915bp) protein (305aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Rhodof_02
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VT09_POLNA rbh
cg2_3.0_scaffold_1371_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8695..9795)
DNA (1101bp) protein (367aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Rhodof_02
dTDP-glucose 4,6-dehydratase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002EEDE39 rbh
dTDP-glucose 4,6-dehydratase
cg2_3.0_scaffold_1371_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9911..11851)
DNA (1941bp) protein (647aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WT7_RHOFD rbh
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=CG_Rhodof_02
ABC transporter-like protein
cg2_3.0_scaffold_1371_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11906..12835)
DNA (930bp) protein (310aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72); K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=CG_Rhodof_02
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EEY2_9BACT rbh
cg2_3.0_scaffold_1371_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12832..14007)
DNA (1176bp) protein (392aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=CG_Rhodof_02
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CVQ4_9BACT rbh
succinyl-diaminopimelate desuccinylase
cg2_3.0_scaffold_1371_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14016..15191)
DNA (1176bp) protein (392aa)
Twitching motility protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WT3_RHOFD rbh
twitching motility protein; K02670 twitching motility protein PilU Tax=CG_Rhodof_02
twitching motility protein
cg2_3.0_scaffold_1371_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15258..16082)
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] Tax=CG_Rhodof_02
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=DAPD_RHOFD rbh
cg2_3.0_scaffold_1371_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16114..17334)
DNA (1221bp) protein (407aa)
succinyldiaminopimelate transaminase; K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] Tax=CG_Rhodof_02
Succinyldiaminopimelate aminotransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WT1_RHOFD rbh
succinyldiaminopimelate transaminase
cg2_3.0_scaffold_1371_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17380..18204)
DNA (825bp) protein (275aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=CG_Rhodof_02
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V90_RHOFD rbh
cg2_3.0_scaffold_1371_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18290..18727)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VX69_POLNA rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1371_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18790..20340)
DNA (1551bp) protein (517aa)
tartrate/fumarate subfamily Fe-S type hydro-lyase alpha protein; K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=CG_Rhodof_02
Fumarase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VA3_RHOFD rbh
tartrate/fumarate subfamily Fe-S type hydro-lyase alpha protein
cg2_3.0_scaffold_1371_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20451..20747)
DNA (297bp) protein (99aa)
monovalent cation/H+ antiporter subunit G; K05564 multicomponent K+:H+ antiporter subunit G Tax=CG_Rhodof_02
Na+/H+ antiporter subunit id=1342794 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
cation:proton antiporter
cg2_3.0_scaffold_1371_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20744..21013)
DNA (270bp) protein (90aa)
Na(+) H(+) antiporter subunit F n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YH79_METFJ rbh
Na(+) H(+) antiporter subunit F; K05563 multicomponent K+:H+ antiporter subunit F Tax=CG_Rhodof_02
Na(+) H(+) antiporter subunit F
cg2_3.0_scaffold_1371_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21007..21495)
DNA (489bp) protein (163aa)
Cation antiporter n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RS66_ALLVD rbh
cation antiporter; K05562 multicomponent K+:H+ antiporter subunit E Tax=CG_Rhodof_02
cation antiporter
cg2_3.0_scaffold_1371_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21492..23027)
DNA (1536bp) protein (512aa)
NADH dehydrogenase (Quinone) n=1 Tax=Marichromatium purpuratum 984 RepID=F9TXY2_MARPU rbh
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit Tax=CG_Rhodof_02
cation:proton antiporter
cg2_3.0_scaffold_1371_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23024..23362)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000372585A rbh
multisubunit Na+/H+ antiporter subunit MnhC Tax=CG_Rhodof_02
cation:proton antiporter
cg2_3.0_scaffold_1371_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23350..24699)
DNA (1350bp) protein (450aa)
putative monovalent cation/H+ antiporter subunit A (EC:1.6.99.5); K05559 multicomponent K+:H+ antiporter subunit A Tax=CG_Rhodof_02
monovalent cation/H+ antiporter subunit A (EC:1.6.99.5)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037B2401
Displaying 26 items

View Taxonomy