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cg2_3.0_scaffold_1687_c

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1687_c_1
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..83
DNA (81bp) protein (27aa)
ydaA_[C]; Universal stress protein family Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
cg2_3.0_scaffold_1687_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111..797
DNA (687bp) protein (229aa)
Carboxymuconolactone decarboxylase Tax=CG_Rhodof_02
carboxymuconolactone decarboxylase
cg2_3.0_scaffold_1687_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

916..2028
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DFEF4 rbh
long-chain fatty acid transport protein Tax=CG_Rhodof_02
long-chain fatty acid transport protein
cg2_3.0_scaffold_1687_c_4
unknown

Not on your lists

comp(1989..2114)
DNA (126bp) protein (42aa)

This feature has no annotations

cg2_3.0_scaffold_1687_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2409..2822)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X4J8_COMTE rbh
hypothetical protein; K09004 hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1687_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2991..3293
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DE6AF6 rbh
class I cytochrome c Tax=CG_Rhodof_02
class I cytochrome c
cg2_3.0_scaffold_1687_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3305..4597
DNA (1293bp) protein (431aa)
flavocytochrome C sulfide dehydrogenase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031A1EF7 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=CG_Rhodof_02
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
cg2_3.0_scaffold_1687_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4606..5205
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002D9BEA8 rbh
cytochrome c, class I Tax=CG_Rhodof_02
cytochrome c, class I
cg2_3.0_scaffold_1687_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5257..6351)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000376784A rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1687_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6430..7389
DNA (960bp) protein (320aa)
UPI00039E2A52 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00039E2A52 rbh
beta lactamase Tax=CG_Rhodof_02
beta lactamase
cg2_3.0_scaffold_1687_c_11
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7386..7871
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D7F2D rbh
hypothetical protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein
cg2_3.0_scaffold_1687_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7883..8587
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002FADBE1 rbh
transcriptional regulator, Crp Tax=CG_Rhodof_02
transcriptional regulator, Crp
cg2_3.0_scaffold_1687_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8680..9003
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002DE9693 rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1687_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9146..9478
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031B79EB
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=CG_Rhodof_02
ArsR family transcriptional regulator
cg2_3.0_scaffold_1687_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9545..10909
DNA (1365bp) protein (455aa)
molybdopterin binding oxidoreductase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002E5E77C rbh
molybdopterin-binding oxidoreductase Tax=CG_Rhodof_02
molybdopterin-binding oxidoreductase
cg2_3.0_scaffold_1687_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10893..11993
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00030CF649 rbh
cytochrome C, class I Tax=CG_Rhodof_02
cytochrome c, class I
cg2_3.0_scaffold_1687_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12059..12514
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E605B5 rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1687_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12594..12905
DNA (312bp) protein (104aa)
Sulphur oxidation protein SoxZ n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6K7_LEPCP rbh
sulfur oxidation protein SoxZ Tax=CG_Rhodof_02
sulfur oxidation protein SoxZ
cg2_3.0_scaffold_1687_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12985..13785
DNA (801bp) protein (267aa)
sulfur oxidation protein SoxA n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0003733BE0 rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1687_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13803..14456
DNA (654bp) protein (218aa)
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1687_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14523..16256
DNA (1734bp) protein (578aa)
5''''-nucleotidase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00030FA0A4 rbh
sulfur oxidation protein Tax=CG_Rhodof_02
sulfur oxidation protein
cg2_3.0_scaffold_1687_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16304..17248
DNA (945bp) protein (315aa)
Zn-dependent hydrolase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KAP9_9GAMM rbh
soxH; SoxH like protein Tax=CG_Rhodof_02
soxH; SoxH like protein
cg2_3.0_scaffold_1687_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17350..17685
DNA (336bp) protein (112aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_1687_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17666..19918)
DNA (2253bp) protein (751aa)
von Willebrand factor type A n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNN5_ACCPU rbh
von Willebrand factor type A Tax=CG_Rhodof_02
von Willebrand factor type A
cg2_3.0_scaffold_1687_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20092..20898)
DNA (807bp) protein (269aa)
ATPase AAA n=1 Tax=Thiobacillus thioparus RepID=UPI00036F53F7 rbh
cbbQ; rubisco activation protein CbbQ Tax=CG_Rhodof_02
cbbQ; rubisco activation protein CbbQ
cg2_3.0_scaffold_1687_c_26
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21156..22397)
DNA (1242bp) protein (414aa)
cbbM; ribulose bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=CG_Rhodof_03
Ribulose 1,5-bisphosphate carboxylase, large subunit n=1 Tax=Leptothrix ochracea L12 RepID=I4Z5C5_9BURK rbh
cbbM; ribulose 1,5-bisphosphate carboxylase, large subunit
Type II ajprobst (7/4/15)
Displaying 26 items

View Taxonomy