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cg2_3.0_scaffold_86_c

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_86_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..237
DNA (237bp) protein (79aa)
Sensory box protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F301_9PROT
putative PAS/PAC sensor protein Tax=CG_Rhodof_02
Sensory box protein (fragment)
cg2_3.0_scaffold_86_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(309..626)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221M9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

799..2052
DNA (1254bp) protein (418aa)
DEAD/DEAH box helicase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SH0_RHOFD rbh
DEAD/DEAH box helicase-like protein Tax=CG_Rhodof_02
DEAD/DEAH box helicase-like protein
cg2_3.0_scaffold_86_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2183..3544
DNA (1362bp) protein (454aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=MIAB_RHOFD rbh
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=CG_Rhodof_02
(dimethylallyl)adenosine tRNA methylthiotransferase
cg2_3.0_scaffold_86_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3612..4640)
DNA (1029bp) protein (343aa)
C4-dicarboxylate ABC transporter n=1 Tax=Acidovorax radicis RepID=UPI0002375C00 rbh
TRAP dicarboxylate transporter subunit DctP Tax=CG_Rhodof_02
TRAP dicarboxylate transporter subunit DctP
cg2_3.0_scaffold_86_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4676..5974)
DNA (1299bp) protein (433aa)
C4-dicarboxylate ABC transporter n=1 Tax=Acidovorax radicis RepID=UPI0002375BFF rbh
TRAP dicarboxylate transporter subunit DctM Tax=CG_Rhodof_02
TRAP dicarboxylate transporter subunit DctM
cg2_3.0_scaffold_86_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5971..6498)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003778929 rbh
dctM; small permease Tax=CG_Rhodof_02
dctM; small permease
cg2_3.0_scaffold_86_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6587..7132
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XJ1_RHOFD rbh
hypothetical protein; K07043 Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7116..7355)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XL6_RHOFD rbh
hypothetical protein; K09954 hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7357..7719)
DNA (363bp) protein (121aa)
Translation initiation factor SUI1 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9Q3_ACIDE rbh
translation initiation factor SUI1; K03113 translation initiation factor 1 Tax=CG_Rhodof_02
translation initiation factor SUI1
cg2_3.0_scaffold_86_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7850..8077
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XL9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8081..9163)
DNA (1083bp) protein (361aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=CG_Rhodof_02
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XM0_RHOFD rbh
cg2_3.0_scaffold_86_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9260..9553
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1A342_9ZZZZ rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9553..9981
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00035D2307 rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10154..10576)
DNA (423bp) protein (141aa)
adinene-specific DNA-methyltransferase Tax=CG_Rhodof_02
adenine specific DNA methylase Mod id=12494249 bin=THIO_HI species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
adinene-specific DNA-methyltransferase
cg2_3.0_scaffold_86_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11325..11627
DNA (303bp) protein (101aa)
Plasmid maintenance system antidote protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NER3_9BURK rbh
plasmid maintenance system antidote protein Tax=CG_Rhodof_02
plasmid maintenance system antidote protein
cg2_3.0_scaffold_86_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11630..12037)
DNA (408bp) protein (136aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=CG_Rhodof_02
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
4''''-phosphopantetheinyl transferase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DC9180 rbh
cg2_3.0_scaffold_86_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12034..12792)
DNA (759bp) protein (253aa)
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=CG_Rhodof_02
Pyridoxine 5'-phosphate synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PDXJ_RHOFD rbh
pyridoxine 5'-phosphate synthase
cg2_3.0_scaffold_86_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12789..13538)
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RECO_RHOFD rbh
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=CG_Rhodof_02
DNA repair protein RecO
cg2_3.0_scaffold_86_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13626..14306)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Agarivorans albus MKT 106 RepID=R9PRT6_AGAAL rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14606..15637)
DNA (1032bp) protein (344aa)
GTPase Era n=1 Tax=Variovorax paradoxus RepID=UPI00035EEEFB rbh
GTP-binding protein Era; K03595 GTP-binding protein Era Tax=CG_Rhodof_02
GTP-binding protein Era
cg2_3.0_scaffold_86_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15634..16320)
DNA (687bp) protein (229aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=CG_Rhodof_02
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RNC_RHOFD rbh
cg2_3.0_scaffold_86_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16337..16690)
DNA (354bp) protein (118aa)
Putative transmembrane protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN2_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_86_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16704..17672)
DNA (969bp) protein (323aa)
peptidase S26A, signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=CG_Rhodof_02
peptidase S26A, signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN3_RHOFD rbh
cg2_3.0_scaffold_86_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17669..19480)
DNA (1812bp) protein (604aa)
Elongation factor 4 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=LEPA_RHOFD rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=CG_Rhodof_02
GTP-binding protein LepA
cg2_3.0_scaffold_86_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19662..21137)
DNA (1476bp) protein (492aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] Tax=CG_Rhodof_02
Peptidase S1C, Do n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN5_RHOFD rbh
peptidase S1C, Do
cg2_3.0_scaffold_86_c_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21176..22207)
DNA (1032bp) protein (344aa)
Putative sigma E regulatory protein, MucB/RseB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN6_RHOFD rbh
putative sigma E regulatory protein, MucB/RseB; K03598 sigma-E factor negative regulatory protein RseB Tax=CG_Rhodof_02
putative sigma E regulatory protein, MucB/RseB
cg2_3.0_scaffold_86_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22204..22824)
DNA (621bp) protein (207aa)
Anti sigma-E protein, RseA, Burkholderiaceae specific n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN7_RHOFD rbh
anti sigma-E protein RseA; K03597 sigma-E factor negative regulatory protein RseA Tax=CG_Rhodof_02
anti sigma-E protein RseA
cg2_3.0_scaffold_86_c_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22876..23520)
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSE8_VARPS rbh
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Rhodof_02
RNA polymerase sigma factor RpoE
cg2_3.0_scaffold_86_c_30
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23520..23987)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XN9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
Displaying items 1-30 of 85 in total

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