name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cg2_3.0_scaffold_139_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(68..985)
----------------- DNA (918bp) protein (306aa) |
GTPase EngC; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=CG_Rhodof_02
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YL1_RHOFD
rbh
GTPase EngC
|
|
cg2_3.0_scaffold_139_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(993..1325)
----------------- DNA (333bp) protein (111aa) |
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=CG_Rhodof_02
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YL0_RHOFD
rbh
transcriptional coactivator/pterin dehydratase
|
|
cg2_3.0_scaffold_139_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1341..2621)
----------------- DNA (1281bp) protein (427aa) |
Ste24 endopeptidase (EC:3.4.24.84)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWS3_9BACT
rbh
|
|
cg2_3.0_scaffold_139_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2629..3255
----------------- DNA (627bp) protein (209aa) |
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] Tax=CG_Rhodof_02
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EIG4_9BACT
rbh
oligoribonuclease
|
|
cg2_3.0_scaffold_139_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3539..3805)
----------------- DNA (267bp) protein (89aa) |
Tax=CG_Rhodof_02
|
|
cg2_3.0_scaffold_139_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3969..4427)
----------------- DNA (459bp) protein (153aa) |
Fic family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08PQ3_STIAD
rbh
filamentation induced by camp protein fic Tax=CG_Rhodof_02
filamentation induced by camp protein fic
|
|
cg2_3.0_scaffold_139_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4676..5275
----------------- DNA (600bp) protein (200aa) |
Fimbrial biogenesis protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK04_METPP
rbh
fimU; fimbrial biogenesis protein Tax=CG_Rhodof_02
fimU; fimbrial biogenesis protein
|
|
cg2_3.0_scaffold_139_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5602..6366
----------------- DNA (765bp) protein (255aa) |
Fimbrial protein pilin n=1 Tax=Azoarcus sp. KH32C RepID=H0PWH9_9RHOO
flmU; fimbrial protein pilin Tax=CG_Rhodof_02
flmU; fimbrial protein pilin
|
|
cg2_3.0_scaffold_139_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6374..7081
----------------- DNA (708bp) protein (236aa) |
Fimbrial biogenesis protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK06_METPP
rbh
pilW; fimbrial biogenesis protein Tax=CG_Rhodof_02
pilW; fimbrial biogenesis protein
|
|
cg2_3.0_scaffold_139_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7078..8403
----------------- DNA (1326bp) protein (442aa) |
Fimbrial biogenesis protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK07_METPP
rbh
pilX; fimbrial biogenesis protein Tax=CG_Rhodof_02
pilX; fimbrial biogenesis protein
|
|
cg2_3.0_scaffold_139_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8435..9562
----------------- DNA (1128bp) protein (376aa) |
Fimbrial biogenesis protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK08_METPP
rbh
pilV; fimbrial biogenesis protein Tax=CG_Rhodof_02
pilV; fimbrial biogenesis protein
|
|
cg2_3.0_scaffold_139_c_12
unknown
|
Not on your lists |
comp(9590..9742)
----------------- DNA (153bp) protein (51aa) |
This feature has no annotations |
|
cg2_3.0_scaffold_139_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9929..11350)
----------------- DNA (1422bp) protein (474aa) |
GTP-binding protein HSR1-related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQZ9_VARPS
rbh
HSR1-like GTP-binding protein Tax=CG_Rhodof_02
HSR1-like GTP-binding protein
|
|
cg2_3.0_scaffold_139_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11334..12734)
----------------- DNA (1401bp) protein (467aa) |
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00037C6D92
rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
|
|
cg2_3.0_scaffold_139_c_trna_1
unknown
|
Not on your lists |
comp(12877..12948)
----------------- DNA (72bp) |
transferRNA
|
|
cg2_3.0_scaffold_139_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12974..13702)
----------------- DNA (729bp) protein (243aa) |
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=CG_Rhodof_02
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=Polaromonas sp. CF318 RepID=J2U2R1_9BURK
rbh
|
|
cg2_3.0_scaffold_139_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13754..14092)
----------------- DNA (339bp) protein (113aa) |
Ferredoxin, 2Fe-2S type, ISC system n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0Y2_VARPE
rbh
ferredoxin, 2fe-2S type, isc system; K04755 ferredoxin, 2Fe-2S Tax=CG_Rhodof_02
ferredoxin, 2fe-2S type, isc system
|
|
cg2_3.0_scaffold_139_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14153..16009)
----------------- DNA (1857bp) protein (619aa) |
Chaperone protein HscA homolog n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WE8_RHOFD
rbh
hscA; chaperone protein HscA; K04044 molecular chaperone HscA Tax=CG_Rhodof_02
hscA; chaperone protein HscA
|
|
cg2_3.0_scaffold_139_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16071..16589)
----------------- DNA (519bp) protein (173aa) |
Co-chaperone protein HscB homolog n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WE9_RHOFD
rbh
co-chaperone Hsc20; K04082 molecular chaperone HscB Tax=CG_Rhodof_02
co-chaperone Hsc20
|
|
cg2_3.0_scaffold_139_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16586..16909)
----------------- DNA (324bp) protein (108aa) |
Iron-sulfur cluster assembly protein IscA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WF0_RHOFD
rbh
iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=CG_Rhodof_02
iron-sulfur cluster assembly protein IscA
|
|
cg2_3.0_scaffold_139_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16930..17328)
----------------- DNA (399bp) protein (133aa) |
FeS cluster assembly scaffold IscU n=1 Tax=Curvibacter lanceolatus RepID=UPI00037139BC
rbh
scaffold protein; K04488 nitrogen fixation protein NifU and related proteins Tax=CG_Rhodof_02
scaffold protein
|
|
cg2_3.0_scaffold_139_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17341..18561)
----------------- DNA (1221bp) protein (407aa) |
cysteine desulfurase IscS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=CG_Rhodof_02
Cysteine desulfurase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WF2_RHOFD
rbh
cysteine desulfurase IscS
|
|
cg2_3.0_scaffold_139_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18589..19125)
----------------- DNA (537bp) protein (179aa) |
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WF3_RHOFD
rbh
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor Tax=CG_Rhodof_02
BadM/Rrf2 family transcriptional regulator
|
|
cg2_3.0_scaffold_139_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19248..21368)
----------------- DNA (2121bp) protein (707aa) |
UvrABC system protein B n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WF4_RHOFD
rbh
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=CG_Rhodof_02
excinuclease ABC subunit B
|
|
cg2_3.0_scaffold_139_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21445..22401)
----------------- DNA (957bp) protein (319aa) |
dihydrouridine synthase; K05541 tRNA-dihydrouridine synthase C [EC:1.-.-.-] Tax=CG_Rhodof_02
tRNA-dihydrouridine synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0X6_ACIDE
rbh
dihydrouridine synthase
|
|
cg2_3.0_scaffold_139_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22552..23034
----------------- DNA (483bp) protein (161aa) |
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8T2_9BURK
rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
|
|
cg2_3.0_scaffold_139_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23037..23486
----------------- DNA (450bp) protein (150aa) |
MaoC domain protein dehydratase n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WFT3_BURSC
rbh
MaoC domain-containing protein dehydratase Tax=CG_Rhodof_02
MaoC domain-containing protein dehydratase
|
|
cg2_3.0_scaffold_139_c_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23494..24012)
----------------- DNA (519bp) protein (173aa) |
NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TA7_RHOFD
rbh
NADH ubiquinone oxidoreductase, 20 kDa subunit Tax=CG_Rhodof_02
NADH ubiquinone oxidoreductase, 20 kDa subunit
|
|
cg2_3.0_scaffold_139_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24009..25610)
----------------- DNA (1602bp) protein (534aa) |
NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TA6_RHOFD
rbh
NADH-ubiquinone oxidoreductase subunit 49kDa Tax=CG_Rhodof_02
NADH-ubiquinone oxidoreductase subunit 49kDa
|
|
cg2_3.0_scaffold_139_c_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25615..27069)
----------------- DNA (1455bp) protein (485aa) |
hydrogenase 4 subunit F (EC:1.6.99.5); K12141 hydrogenase-4 component F [EC:1.-.-.-] Tax=CG_Rhodof_02
hydrogenase 4 subunit F (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TA5_RHOFD
rbh
|