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cg2_3.0_scaffold_669_c_5

Organism: CG2_30_FULL_Comamonadaceae_59_20_curated

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 13 / 38 MC: 1
Location: 4543..6879

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y63_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 788.0
  • Bit_score: 1213
  • Evalue 0.0
  • rbh
sigma 70 (RpoD); K03086 RNA polymerase primary sigma factor Tax=CG_Rhodof_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 778.0
  • Bit_score: 1507
  • Evalue 0.0
sigma 70 (RpoD) similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 788.0
  • Bit_score: 1213
  • Evalue 0.0

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Taxonomy

CG_Rhodof_02 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2337
ATGACTGCTGCCAAGCCAACCAAACCTGCCGCATCCGAAACGCAGGCCAGCGTTGCTGCCAAACCTGCCAAATCTGTGATCGCGGCCAACCCCGCCATTTCCACTGCCAAACCGAAAGCCGCACCTGTGACCGTCTCCAAAAGCAAACCCAAAGCCATTTCCGAAGATAAAAAAGACGCCGTCAAAACGGTTGAACCTGTCGAGAAAAAGAAAACTGTAAAAGCAGCGGCAACCGCCGCTCCCGCCAAGGCTGCGGCAAAGCGCGCACCCAAAGCGAAAGCTGTCAAGGCGGGTAAAAAAGGCGAGGACAACGATGTCGACATGAGCGACATCGAAGACGACCTGGTCGGTGAACCCGAAGTGGTGGAAGTCACAGCCGAAAAGGTCAAGCCGCTGCGCATGAAAATCAGCAAGGCCAAAGAACGCGCCTTGATGAAAGAGTTTGGCCTGGACGAGACCGTGTTGTCCGAAGACGATCTGAACAAGCGCCGCCTGAGCCTCAAGGCATTGATCAAGCTCGGCAAAACTCGCGGCTACCTGACGCACGGCGAGATTTCCGATCACCTGCCCGACAAGCTGGTTGACGCCGAAACCATGGAAGTGGTGGTGTCCATGCTCAACGACATGGGTGTGGCCGTGTACGAACACACGCCCGATGCCGAAACCTTGCTACTCAACCAGAATGGCCCCACCGCCGCCACTGAAGAGGAGGCTGAAGAAGAAGCCGAAGCTGCCCTGAGCACGGTGGACAGCGAATTTGGCCGTACCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGTACGGTCGAACTGCTCACGCGTGAGGGTGAAATCGAGATCGCCAAGCGCATTGAAGGCGGTCTGATGGCCATGATGGAGGCCATTTCGGCCTCACCCGCAAGCGTTGTTGAAATCCTGCAATTAGGTGAAGACATCCGCAGCGACAAGGTGGTGATCACCACCATCGTCGATGGCTTCACCAACCCCAACGAGGCCGACGACTACGTGGCCGAAGAAGACTTTGACGAATTTGACGCCGACGATGACGACGACGGCAACGGCGGCTCCAAGGCCCTGACCAGGAAGCTCGAAGAACTCAAAAAAGAAGCCATGAGTCGCTTTGACCGCTTGCGCGAGTACCACGAAAAAATTCTCAAGACCTACGAGAAGGAAGGATATGGCACGCCGGTCTACCTAAAAACACAAAAGCTGTTGTCAGATGAGCTGATGTCGATCCGCTTCACTGCCAAAACCATCGAAAAACTGTGCGACATGGTGCGTGGTCAGGTCGATGAAGTGCGCAAAAAAGAGCGCGAACTGCGCCGCATCATTGTCGACAAATGCGGCTACCCGCATGAGCAGTTCATTGCCGAGTTCAGCGGCCGCGACAAGCACCATCACAAGGTGCCCAGCCATTTGCTCGATCTGAAATGGATCGAAAAACATGCCGCCGCAGGCAAGTCGTGGAGCGCGGTGATGGGTCGCAACATCCCGCCAGTGCAGGAGTTGCAGCAGGGTCTGATGAACTTGCAAACCAAGGTAGTGGTGCCACTGGATCAGCTCAAGGACATCAACAAACGCATGAACGAGGGCGAATACGCTTCACGCGCAGCTAAAAAGGAAATGATCGAGGCCAACCTGCGGCTGGTCATTTCCATCGCCAAGAAATACACCAACCGCGGCCTGCAATTCCTCGATTTGATTCAAGAAGGCAACATCGGCCTGATGAAGGCGGTGGACAAATTCGAATACCGGCGCGGCTACAAATTCTCGACCTACGCCACCTGGTGGATTCGTCAGGCCATCACGCGCTCAATTGCTGATCAGGCGCGCACCATTCGTATCCCGGTGCACATGATCGAAACCATCAATAAGATGAACCGCATCAGCCGCCAGCACTTGCAAGAGTTTGGCTTTGAGCCCGATGCCTCGGTACTCGCCGAGCGCATGGAAATCCCTGAGGACAAGATCCGCAAGATCATGAAGATAGCCAAAGAGCCGATCTCGATGGAAACGCCCATCGGCGACGACGACGACAGCCACCTGGGCGACTTCATCGAAGATGGCGCCAACACGGCACCCATGGAAGCCGCCATGCAGGCTGGCCTGCGCGACGTGGTCAAGGATATTCTTGACAGTCTGACGCCGCGCGAAGCCAAGGTGCTGCGCATGCGTTTTGGCATCGAAATGACCAACGATCACACCTTGGAAGAAGTGGGCAAGCAGTTTGACGTGACGCGTGAGCGTATTCGTCAAATTGAAGCCAAGGCGCTGCGCAAACTCAAGCACCCGAGCCGCTCCGACAAGCTGCGCAGTTTTACTGACAACTTGTAA
PROTEIN sequence
Length: 779
MTAAKPTKPAASETQASVAAKPAKSVIAANPAISTAKPKAAPVTVSKSKPKAISEDKKDAVKTVEPVEKKKTVKAAATAAPAKAAAKRAPKAKAVKAGKKGEDNDVDMSDIEDDLVGEPEVVEVTAEKVKPLRMKISKAKERALMKEFGLDETVLSEDDLNKRRLSLKALIKLGKTRGYLTHGEISDHLPDKLVDAETMEVVVSMLNDMGVAVYEHTPDAETLLLNQNGPTAATEEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMAMMEAISASPASVVEILQLGEDIRSDKVVITTIVDGFTNPNEADDYVAEEDFDEFDADDDDDGNGGSKALTRKLEELKKEAMSRFDRLREYHEKILKTYEKEGYGTPVYLKTQKLLSDELMSIRFTAKTIEKLCDMVRGQVDEVRKKERELRRIIVDKCGYPHEQFIAEFSGRDKHHHKVPSHLLDLKWIEKHAAAGKSWSAVMGRNIPPVQELQQGLMNLQTKVVVPLDQLKDINKRMNEGEYASRAAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQEFGFEPDASVLAERMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDGANTAPMEAAMQAGLRDVVKDILDSLTPREAKVLRMRFGIEMTNDHTLEEVGKQFDVTRERIRQIEAKALRKLKHPSRSDKLRSFTDNL*