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scnpilot_expt_750_bf_scaffold_324_7

Organism: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 5618..6538

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF55_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 275.0
  • Bit_score: 388
  • Evalue 5.10e-105
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=58133 species="Bacteria; Proteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 299.0
  • Bit_score: 392
  • Evalue 4.90e-106
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 289.0
  • Bit_score: 378
  • Evalue 1.50e-102

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGCCCGATATTTTCTTCAAAGAACCGGAATCCACATTGCTCGAAACTTCCGGCTTGGAGCCAGCCGTGGGAAATGAGATTCCCGATGATTTTCTGTCAACCGACCTCGCGCCGACTTACTTCAAGGAAATTGGCCATGGCGTCTCGCCGGGCAGACAGGAAGAAGCCGAGCTTGCCCGGCTCGCCAAGCAAAATAACGATGATGCGCGCCGGAAAATGATGGAGTGCAACCTGAGGCTCGTGGTGAGTATCGCCAAGCTTTACGCCAATCACGGCGTCGCGCTGCCGCATCTTATCAAGGAAGGCAAAATAGGGATGATGCACGCGCTGGACAAATTCGATCCGGAACGTGGCTTTCGTTTCTCCACTTATGCCACCTGGTGGATACGGCAGAACATCGAACGCTGCATCATGAATCAATCGCGCACGATTTGCCTGCCTGTCCATGTCATCAAGGAACTGAACGTTATTCTGCAGGCAGTCCGCCACCTTGAAGCCCATTCAGGCAGGGAGCCTACACCGCAAGATGTGGCCCATCTGCTGGGCCGCCCCCTGGACCATGTGGAGCGCATGCTATCCTTGAACATGAGCATGATGTCGCGGCATACCCTGTTCGACGTGGATCCTTTCCTGTCAGTCGGCGATGTCATGGCCGATGAAAAATCGCCCGGCCCCGATGCAATGCTGGAGCAATCCGGGATCGAAGACCGGGTAAGGGAGTGGCTCAGCCGCTTGAACGACACGCAACGCCATATCATCGAGCATCGCTATGGGCTGAATACCTGCGAAATTCAAACTTTGGAGCAATTGGCGTCACGCCTTGGGCTTACCCGCGAACGGGTACGCCAGATTCAGCTGGAGGCAGCGGAGACATTGCGCGGCATATTGAACCTGAATCCGGCAGTTGACCGCTCTTTTTAG
PROTEIN sequence
Length: 307
MPDIFFKEPESTLLETSGLEPAVGNEIPDDFLSTDLAPTYFKEIGHGVSPGRQEEAELARLAKQNNDDARRKMMECNLRLVVSIAKLYANHGVALPHLIKEGKIGMMHALDKFDPERGFRFSTYATWWIRQNIERCIMNQSRTICLPVHVIKELNVILQAVRHLEAHSGREPTPQDVAHLLGRPLDHVERMLSLNMSMMSRHTLFDVDPFLSVGDVMADEKSPGPDAMLEQSGIEDRVREWLSRLNDTQRHIIEHRYGLNTCEIQTLEQLASRLGLTRERVRQIQLEAAETLRGILNLNPAVDRSF*