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scnpilot_expt_750_bf_scaffold_854_9

Organism: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 8373..12602

Top 3 Functional Annotations

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Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleB similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 999.99
  • Bit_score: 2642
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 999.99
  • Bit_score: 2621
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR75_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 999.99
  • Bit_score: 2637
  • Evalue 0.0
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4230
ATGAAAGCACTGCTTGATTTATTCAAACAGGTTACCCAGAAGGAAGAATTCGACTCGATCAAGATCGGACTGGCTTCTCCCGAAAAAATACGTTCCTGGTCTTATGGCGAGGTGAAGAAACCGGAAACCATCAATTACCGCACGTTCAAGCCGGAGCGGGATGGCCTGTTCTGCGCCAAGATTTTTGGCCCCGTCAAGGATTACGAGTGCCTGTGCGGGAAGTATAAACGCCTGAAGCACCGTGGCGTGATCTGCGAGAAATGCGGCGTCGAGGTAACACTGGCCAAGGTTCGACGCGAGCGCATGGGCCATATAGAACTCGCATCCCCCGTAGCGCATATCTGGTTCCTCAAGTCCCTGCCATCGCGTCTTGGCATGGTGCTGGACATGACGCTCCGGGACATCGAACGCGTGCTCTATTTCGAGGCCTACGTGGTTACCGACCCGGGCATGACGCCGCTCAACCGGTGCCAACTGCTTACAGACGACGATTATCGCGCCAAAACGGAGGAGTACGGAGATGATTTTCGCGCCAGCATGGGAGCGGAAGGAATTCGTGACTTGCTGGCAAACCTGAACATTCGCGTCGAAATCGATAATCTTCGGCGAGAAATGGGAACGACAGGTTCGGAAACCAAGATGAAGAAGATCTCCAAGCGCCTGAAGGTGCTGGAGGCGTTCAATAAATCCGGCATCAAGCCGGAATGGATGGTGTTGGCGGTCTTGCCGGTCCTGCCACCCGAATTACGCCCGCTGGTTCCCCTGGATGGAGGACGTTTCGCCACCTCGGACCTGAACGACCTGTACCGCCGCGTCATCAATCGCAACAACCGGCTGAAGCGTCTGCTCGAGTTGAAGGCTCCAGAAATCATTGTGCGCAATGAAAAGCGCATGTTGCAGGAAGCGGTCGATTCGTTGCTGGATAACGGCCGCCGGGGCAAGGCCATGACGGGCGCCAACAAGCGGCCGCTGAAATCCCTGGCCGACATGATCAAGGGCAAGGGAGGGCGGTTCCGTCAAAATCTGCTCGGGAAACGCGTCGATTACTCCGGCCGGTCCGTGATCGTGGTTGGGCCGCAGCTCAAATTGCATCAATGCGGCCTGCCAAAGAAAATGGCGCTGGAATTGTTCAAGCCGTTCATTTTCAACAAGCTCGAAATCATGGGTATTGCCAGCACCATAAAGGCTGCGAAGCGCGAGGTGGAGAATGAAAGCCCTGTAGTGTGGGATATTCTCGAGGATGTGATTCGCGAACACCCGGTGATGCTGAACCGCGCGCCTACGCTGCATCGGCTTGGCATCCAGGCATTCGAGCCGGTTTTGATAGAAGGCAAGGCCATTCAGCTTCATCCTCTGGTATGCGCAGCTTTCAATGCCGACTTTGACGGTGACCAGATGGCAGTCCATGTCCCGCTCTCGCTGGAAGCGCAAATGGAATGCCGTACGTTGATGATGTCAACCAATAACGTGCTGTCGCCGGCCAACGGCGAGCCGATCATCGTGCCATCGCAGGATATCGTTCTTGGCTTGTACTACACCACGCGCGAGAAGGTCAATGCGCGCGGCGAAGGCATGATTTTCTCCAACATCGGCGAAGTATCGAGAGCTTACGAAAGCCGCATAATCGAATTGAACGCCCGGATTACCGTGCGCATCAAGGAGTATGAGATAGACCGCGATGGCGAGCGCAGCGAAAAGACGACTCGTTACGAGACGACGGTGGGGCGGGCTTTGCTCTCCGAAATCCTTCCAACCGGGCTGCCATTCCCATTGATCAACAAGGTACTCAAGAAGAAGGAAATTTCCAAGCTTATCAATGCCAGTTTCCGGCGCTGCGGGCTGCGCGAGACGGTCATTTTTGCCGACAAGCTGATGTACTCCGGCTTCAGCTATGCCACGCGTGCCGGCATTTCGATCTGTCTGGACGACATGCTCACCCCTGCGCAGAAAGATGCCATCATCAATGCGTCGGAGAAGGAAGTGCAGGAGATCGAGGTCCAGTATACCTCGGGGCTCGTCACGCAAGGGGAGCGCTACAACAAAGTGGTGGACATCTGGGGCCGGGCCGGTGATCAGGTTGCGAAGGCCATGATGGATCAGCTCGGTGTCGAGCCGATAGTTGATCCGGCCACGCGGGAGGTCAAGACGGATAACAAAGGCGAGCCGCTGACGCAGGAGTCCTTTAATTCCATCTACATGATGGCGGACTCGGGCGCGCGCGGGTCCGCCGCCCAGATTCGGCAGTTGGCAGGGATGCGCGGTCTGATGGCAAAGCCCGATGGCTCGATCATCGAGACGCCTATCACCGCGAATTTCCGTGAAGGGTTGAACGTGCTTCAGTATTTTATTTCCACCCACGGCGCCCGCAAGGGTCTTGCCGATACGGCATTGAAAACGGCAAATTCCGGTTATCTTACCCGCCGTCTGGTCGATGTCACCCAGGATCTCGTGGTAACCCAGGAAGACTGCGGCACCAGTAACGGCGTTGTCATGAAAGCTCTGGTTGAAGGCGGTGAAGTCATTGAAGCCCTGCGAGAGCGGATACTCGGGCGGGTAGTGGCCAACGACATCGTCAATCCCGAGCATCAGGCAGTGATTTATCCTGCGGGCATCCTCCTGGATGAAAACGCGGTGGATACCATTGAATCTCTGGGAATCGATGAAGTCAAGGTAAGGACTCCCCTTACCTGCGAAACGCGCTATGGCCTTTGCGCCAAGTGCTATGGAAGGGATCTGGGGCGTGGAACGCCGGTGAATGTGGGTGAGGCCGTGGGCGTCATAGCTGCTCAATCCATTGGCGAGCCCGGCACCCAACTTACGATGAGAACATTCCACATCGGAGGCGCCGCTTCCCGAACGGCGGTGGCCAGCCAGGTGGAAAGCAAATCCAACGGTGTCGTGCACTATTCTCCTACCATGCGCTATGTGACCAACGCCCGCAATGAACTGGTCGCGATTTCCCGTAGCGGCGAGGTAGTGATACATGATGACAACGGCCGGGAGCGGGAGCGTCACAAGGCGCCTTATGGAGCAACCCTGCTGATACGCGATGGCGAGGTTGTCCGGGCAGGGCAGGTGCTGGCCGCCTGGGACCCGCATACTCGTCCCATTATCACCGAGTACGCGGGCAAGGTTCGCTTCGAGAACGTGGAAGAAGGCGTTACCGTGGCCAAGCAGATAGACGAGGTGACTGGCTTGTCCACGCTTGTGGTAATCGATCCGAAACGGCGCGGCGTGGCTCAAACCAAGGGCCTGCGTCCGATGGTGAAGCTGCTGGACGAGGATGACAAGGAAGTAAGGCTGGCCGGCGGTACCTTGCCCGTCAACATCACTTTTCAGGTCGGCTCGGTTATCACCGTTCGGGACGGCCAGCAGGTAAGCGTGGGCGAGGTGCTGGCGCGTATTCCGCAAGAGAGTTCAAAAACCAGGGATATTACGGGGGGGTTGCCGCGGGTTGCGGAATTGTTTGAGGCGCGATCGCCCAAAGATGCCGGAGTCTTGGCGGAGGTGACCGGAATTGTATCTTTTGGTAAGGATACCAAGGGCAAGCAGCGGCTGGTCATTACCGATCTGGACGGGATTTCTCATGAATATCTGATCCCCAAAGACAAACATGTCACTGCACATGACGGCCAGGTGGTGAACAAGGGTGAAAGTATCGTCGATGGGCCAGCCGATCCCCACGACATTTTACGGCTGCTAGGCGTAGAGGCCTTGGCCCGCTACATCACCGACGAGGTCCAGGATGTTTATCGCCTGCAGGGTGTCAAGATCAATGACAAGCACATCGAGGTGATCGTGCGCCAGATGTTGCGCCGTGTGCAGATCACGGATGCCGGAGACACGCGTTTCATACCTGGCGAGCAGGTGGAGCGTGCAGACATGCTGGCGGAAAATGAGGCGGTAATGGCCGAGGACAAGAAACTCGCGCAATATGAGTTCATGCTGCTGGGTATTACCAAGGCTTCCCTATCCACGGATTCGTTCATTTCGGCCGCTTCCTTCCAGGAGACTACACGCGTGCTGACGGAAGCAGCCATCATGGGCAAGAAGGATGATCTGCGTGGCCTGAAGGAAAATGTGATCGTCGGGCGACTCATTCCCGCGGGTACCGGTCTTACCTTCCATAACACGCGCAAGAAGCAGAGGTTGCTGCTGGATGCGGGGGAAAGTCTGGATCTGGGCGAAATCGAGACCGAAGAAATGCGCGACAGCGGATATACGGTCTAG
PROTEIN sequence
Length: 1410
MKALLDLFKQVTQKEEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLNRCQLLTDDDYRAKTEEYGDDFRASMGAEGIRDLLANLNIRVEIDNLRREMGTTGSETKMKKISKRLKVLEAFNKSGIKPEWMVLAVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLEIMGIASTIKAAKREVENESPVVWDILEDVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMECRTLMMSTNNVLSPANGEPIIVPSQDIVLGLYYTTREKVNARGEGMIFSNIGEVSRAYESRIIELNARITVRIKEYEIDRDGERSEKTTRYETTVGRALLSEILPTGLPFPLINKVLKKKEISKLINASFRRCGLRETVIFADKLMYSGFSYATRAGISICLDDMLTPAQKDAIINASEKEVQEIEVQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMDQLGVEPIVDPATREVKTDNKGEPLTQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTQEDCGTSNGVVMKALVEGGEVIEALRERILGRVVANDIVNPEHQAVIYPAGILLDENAVDTIESLGIDEVKVRTPLTCETRYGLCAKCYGRDLGRGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTAVASQVESKSNGVVHYSPTMRYVTNARNELVAISRSGEVVIHDDNGRERERHKAPYGATLLIRDGEVVRAGQVLAAWDPHTRPIITEYAGKVRFENVEEGVTVAKQIDEVTGLSTLVVIDPKRRGVAQTKGLRPMVKLLDEDDKEVRLAGGTLPVNITFQVGSVITVRDGQQVSVGEVLARIPQESSKTRDITGGLPRVAELFEARSPKDAGVLAEVTGIVSFGKDTKGKQRLVITDLDGISHEYLIPKDKHVTAHDGQVVNKGESIVDGPADPHDILRLLGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQITDAGDTRFIPGEQVERADMLAENEAVMAEDKKLAQYEFMLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLTFHNTRKKQRLLLDAGESLDLGEIETEEMRDSGYTV*