ggKbase home page

scnpilot_expt_750_bf_scaffold_464_24

Organism: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 24375..26240

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKU9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 614.0
  • Bit_score: 836
  • Evalue 1.90e-239
  • rbh
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 614.0
  • Bit_score: 836
  • Evalue 2.60e-239
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 613.0
  • Bit_score: 716
  • Evalue 6.10e-204

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1866
ATGCTGAATTTTCGCGCAGACATCGAGTGGGTGAACGGGCAACCGTTTTCGCGCCGCTACGGCGATATCTATTTCTCGAGAGAGGGAGGGCTGGCGGAGAAACGCCACGTCTTTTTGGATGGCAATAACCTTCGGGAACGTTTTGCCTCACTGGGGTGCAGGCAGACATTCACCATAGGCGAGACAGGCTTTGGCATAGGCCTTAATTTCCTGTGCGCACGACAATTATTCGAAGAAACCGCCAACGCAGGCAGTAGCCTCGACTATTTCAGCGTGGAGAAATACCCGCTGGATGAGCGCGAACTGGAACAGGCGCTCGCGCCATGGCCGGAATTTCGACGATACGCAGTGGAATTGATCCAGCGCTGGCGTCGCCGTGTCCCTGGCTGGAACCGGTGGAGTTTTGCGAATGGCCGTGTCCGGCTCACGCTGGTGATCGACGATGCGCTGACGGCGTTGCCCGAAGCTTCCGCGTCTGTCGATGCCTGGTTTCTCGACGGATTTGCCCCCTCGCATAATCCTGAGCTCTGGACGCAACCCGTGTGCGAGAGCATCGTATCCGCCTCGAGGTCCGGCACCACTTTTTCCACCTACACCTGTACCGGCTGGGTGCGGCGCAGCCTGGAAAAGGCCGGTTTCCAGGTCGACAAGGTTCCGGGCTTCGGCCGCAAACGCGAAATGCTCCGGGGATGTCTGCCTGGGGCAGCGAATCCCTCATCGCCTCCGGCGACAGCCATTGTAATCGGCGCGGGCCTCGCGGGTTGCAGCGTGGCTTCCGCCCTGGCGGCCCGCGGCGTTGCCGTATCGCTCATCGAGCAGGCGCCGCGCCTTGCGGCCGCCGCCTCCGGAAATTCCCTGGGCATCCTCCATGCCCGCCTGAGTGCGGGAATGAGCCCGCTGCAGCGCTTCGTTCTTGCCTCGTACGGATATGCTCTTGCCTTGCTCGACGAAAAGCTGCCCGTGGACGGAATTGCACGCGCGGAATGCGGAGAATTGCAGCTTGCCTTCTCGGATGACGAAACCAAGCGTATCGACAAACTGGCAGCGCTTGATTGGCCCCCGCACATCTTGCAACATGTCGGGCCGGCAGACGCATCGAACCTGGCTGGCCTAAAGCTCGCACATGGCGGCTTGTGGTTCCCTGCAGGAGGATGGGTCGTACCGGCAAGCGTGTGCGAAGTACTAGCGGCTGATCCCCGGATCACGCAACGGCTGGGCTGCAGCGCAGATTCGCTGGCCTGGAAAAAAGATACCGATGCAGGATGGCATGTGGCAGGCCAGGATCAGAATGGACAATCCTGGGAGCAAGCCGCTCAGATAGTGGCGGTTTGCACAAGTTACCAGGTGAAGAACTTCAAACCGCTGGCAGACTTTCCGCTGACGCCGGTCAGGGGACAGATTACCGCGCTGCCCGTCACGCCACCCAGCAAAAATTTGCGCACTATTGTGAGCGCTCGCGCTTACCTGTCTCCCGGGGTTGCGGGCACACATGTGGCCGGCGCCACGCATGGCTTCAACGATGTGTCGCTCGAACTGCGAACCTGCGATCACCTGGAAAACCTGCACAAGCTCTCCGAAATCTCTCCGGCCCTCGTGAAGGCATGGGATAACGATACGCTCCATCCCGCCCGGCTCGGAGGCCGCGCATCGGTGCGTGCCTCGCTTCCGGGCGCTATGCCGCTGGCCGGCGAATTTCTCCCCGGGTTATTTACGAGTCTGGGGCACGGCACGCGCGGCCTGCTGACCGCCGGGCTCTGCGGAGAATTGATCGCAGCAGCAGCTTGCAAGCAACTGCTCCCCCTGCCGGGGGCGTTGTCCAGAGCGCTGAATCCGGCTGTGCGGCACGCAAGCCGCACCGCTCGCTGA
PROTEIN sequence
Length: 622
MLNFRADIEWVNGQPFSRRYGDIYFSREGGLAEKRHVFLDGNNLRERFASLGCRQTFTIGETGFGIGLNFLCARQLFEETANAGSSLDYFSVEKYPLDERELEQALAPWPEFRRYAVELIQRWRRRVPGWNRWSFANGRVRLTLVIDDALTALPEASASVDAWFLDGFAPSHNPELWTQPVCESIVSASRSGTTFSTYTCTGWVRRSLEKAGFQVDKVPGFGRKREMLRGCLPGAANPSSPPATAIVIGAGLAGCSVASALAARGVAVSLIEQAPRLAAAASGNSLGILHARLSAGMSPLQRFVLASYGYALALLDEKLPVDGIARAECGELQLAFSDDETKRIDKLAALDWPPHILQHVGPADASNLAGLKLAHGGLWFPAGGWVVPASVCEVLAADPRITQRLGCSADSLAWKKDTDAGWHVAGQDQNGQSWEQAAQIVAVCTSYQVKNFKPLADFPLTPVRGQITALPVTPPSKNLRTIVSARAYLSPGVAGTHVAGATHGFNDVSLELRTCDHLENLHKLSEISPALVKAWDNDTLHPARLGGRASVRASLPGAMPLAGEFLPGLFTSLGHGTRGLLTAGLCGELIAAAACKQLLPLPGALSRALNPAVRHASRTAR*