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scnpilot_expt_750_bf_scaffold_278_19

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_68_35

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 21356..22411

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XLL2_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 327.0
  • Bit_score: 275
  • Evalue 5.50e-71
putative Bug-like extra-cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 327.0
  • Bit_score: 275
  • Evalue 1.60e-71
Putative Bug-like extra-cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU53767.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 327.0
  • Bit_score: 275
  • Evalue 7.70e-71

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
GTGACCGAAACCCGTCATCGAGCGAAGTCGTCGACCCGGCCGGCTGGCCAATCCGAAACGAGCGTGCCGCTCCCCACCCGCCGACGGCTGATCGCCGGCCTGCTGGCGGGGGCAGCGACGGCCGGCGCCACGCGTGCGCAGCCTGCGTTCGGGGCGGCCAGCGGGTTCCCGAACCGGCCGCTGCGGTTCGTGGTGTCATTCCCGCCCGGAGGCGCGTCCGACACGTCGGCGCGGCTGATCGCGGCGAGGCTCGGCCAGCGCCTCGGCCAGCCGGTGGTCGCCGAGAACCGGCCTGGCGCGGCCGGCAACATCGCGACGAGTGCCGTGGTCCGCGGCCCTGCCGACGGGTATCAACTGCTGCTGGGCGCGTCCTTCCTCACCGTCAATCCGTGGCTGTACAAGAACGCCGGATACGACCCGGTCCGCGATCTGGCGCCGTTGGGCCGGCCGATCTACAAGCGGGTCGTGCTGGTCGGGCGCCCCGATCTGCCCGCGTTCGCGAACCTGCTCGAACAGGCGAAGCGCACGAATGCGCCGATCCGGGTGGCGTCACCCGGCGCCGGAACCTTGTCGCACCTCGCCGGCGAGCTGCTTCGGCTGCGCACCGGTGCACCGATGATTCACGTGCCGTACCGGGGATCGGTCGCGGCGCTCACCGATCTGGCTGGGCAGCAGGTCGACGTGATGTTCGATGCGGTGGCCTCGGCCATGCCGATGATCAAAGGTGGGCGCATCAAGGCGGTCGCGGTGCCCGAGACGGCGCGCAACCCGCAGTTGCCCGAGGTGCCGACGCTCGCCGAGCTCGGCGTGCCCGGCATCGTGATCCAGGCGTGGGACGCAATGTTCGCGCCGGCCGCGACGCCCCCCGAGGTACTGGAGACCCTGCGCGCTCACCTGGAAGCGGTGCTCGCCACGCCCGAAGTTGCCGACGAGTTGCGCTCGAGAGGCCTGGAGGTCGGCGAGCCCACCACGCCGCAGGCGTTCATCGCTCGCCTGCAGGCCGAAACCGAGCTGTGGCGGCGGACCGCCGAGGCGGCGGGCGTCACCGCCGACTGA
PROTEIN sequence
Length: 352
VTETRHRAKSSTRPAGQSETSVPLPTRRRLIAGLLAGAATAGATRAQPAFGAASGFPNRPLRFVVSFPPGGASDTSARLIAARLGQRLGQPVVAENRPGAAGNIATSAVVRGPADGYQLLLGASFLTVNPWLYKNAGYDPVRDLAPLGRPIYKRVVLVGRPDLPAFANLLEQAKRTNAPIRVASPGAGTLSHLAGELLRLRTGAPMIHVPYRGSVAALTDLAGQQVDVMFDAVASAMPMIKGGRIKAVAVPETARNPQLPEVPTLAELGVPGIVIQAWDAMFAPAATPPEVLETLRAHLEAVLATPEVADELRSRGLEVGEPTTPQAFIARLQAETELWRRTAEAAGVTAD*