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scnpilot_expt_750_bf_scaffold_278_25

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_68_35

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(30077..31006)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XMJ1_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 33.0
  • Coverage: 297.0
  • Bit_score: 172
  • Evalue 7.60e-40
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 297.0
  • Bit_score: 172
  • Evalue 2.10e-40
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU53766.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 297.0
  • Bit_score: 172
  • Evalue 1.10e-39

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGAACACGCGCCTGCTACGTCCCATCCCTTCGCAATCCGGCTTCAAGCCCAAGCAGCTTGCACTCCTGGCCGCGCTGGCAGAGGTCAAGACGCTGCGTGGCGCGGCCAACCGGATCCACGTCTCGCAACCGGCGGCCACGCGGCTGCTGAGGGAACTGGAGCAGATGCTGGGTGTGCGGCTGTTCGACCGGTCAACGCTCGGTCTGCATGTCACCGCTGCGGGTGAGGCGATGATCGAGCATGCACGCTCGCTCCAAGCAGGCATGCTGAACGCGTACCGCGAAGTCCACGACGCAGCAGCCGGCACCATGGGGACGGTGCGGCTCGGCATATTCGGCTCGGTCGACCCGGTATTCCTGTCACGCGCGATCGCTGCGCTCAAGCAGGCTGCGCCTCGCGTGCATGTCGCCATCAAGGAGGCGCCAAAGGAATTCCTGTTCCAGGCCCTGCGCCACAACGACATCGACGCTGCGATCAGCCGGGTATCGGTCGACAGTGGCGCGCGCTGGGTCAGCCAGCAGCCGCTGTATACGGAGACATTCTCGCTGGTCTGCGGCCGAAGCGGTCCGCGGAAGGGTAGATCCGCAGCCATCGAGCTCCTGCTCGACATACCCTGGATACTGCCCACTGCCGAGTCGCTGATGCGCCAGCGGTTGAGCGCGTTCTGCCTTGACAGGTACGGCCGTGCACCGCAGAGCTACGTGGATTCGGAATCGACGCTGAGCACACTCGCGTTGTTCGACGCCACCCCCTATCCCGGCGTGCTGGCCGCCAGCGTTGCCCGTTACTTCATCAAATCCGGACAACTGCGCCTGCTGGCCGATCGGCTTGCAGGAATAGAGAGCTCGGTGGTCCTGGTGACCAGGGCCGGAGAGGTTCCCCGGCCCAGTCTCGCGGGATTGATCCGCGCGCTGAACGCCTGCTGCTAG
PROTEIN sequence
Length: 310
MNTRLLRPIPSQSGFKPKQLALLAALAEVKTLRGAANRIHVSQPAATRLLRELEQMLGVRLFDRSTLGLHVTAAGEAMIEHARSLQAGMLNAYREVHDAAAGTMGTVRLGIFGSVDPVFLSRAIAALKQAAPRVHVAIKEAPKEFLFQALRHNDIDAAISRVSVDSGARWVSQQPLYTETFSLVCGRSGPRKGRSAAIELLLDIPWILPTAESLMRQRLSAFCLDRYGRAPQSYVDSESTLSTLALFDATPYPGVLAASVARYFIKSGQLRLLADRLAGIESSVVLVTRAGEVPRPSLAGLIRALNACC*