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scnpilot_expt_750_bf_scaffold_364_8

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_68_35

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7012..7665

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 211.0
  • Bit_score: 340
  • Evalue 2.10e-90
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 215.0
  • Bit_score: 328
  • Evalue 1.20e-87
3-isopropylmalate dehydratase small subunit n=1 Tax=Herbaspirillum lusitanum RepID=UPI000382C269 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 215.0
  • Bit_score: 336
  • Evalue 1.60e-89

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Taxonomy

Burkholderia sacchari → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGTAGCCTGACGGTCCACCGCGGCCTGGTCGCGCCGCTCGATCGAGCGAACGTCGACACCGACGCGATCATTCCGAAGCAGTTCCTGAAGTCGATCAAGCGCAGCGGCTTCGGGCCGAACCTGTTCGACGAATGGCGCTACCTCGATCGCGGCGAACCGGGCATGGACAACAGCCGCCGGCCGCCGAACCCCGATTTCCCGCTCAACCAGGCGCGCTACCGCGGGGCCTCGGTCCTGCTCACGCGCAAGAACTTCGGCTGCGGCTCCTCGCGCGAGCATGCGCCGTGGGCACTGGAAGACTACGGCTTTCGCGTGATCGTGGCGCCGTCGTACGCCGACATCTTCTACAACAACTGCTTCAAGAACGGCCTGCTGCCGGTGCGACTGCCGGAGGCCGACGTCGACTGGCTGTTCGACCAGCTCAACGCCTTCGTCGGCTTCGAGCTGGTGGTCGACCTGCCGCAGCAGCAGGTGCGCACCGTGGACGGGGCGCGCAGCTTCGGCTTCGAGGTCGACCCGTTCCGCAAGGAGTGCCTGCTCGGCGGGCTCGACGAGATCGGGCTCACGCTCAGGCATGCCGACCTGATTCGCGAATTCGAGAGCAAACGCTTGCGCGACCAGCCGTGGCTCACCACCACGCTGGCCGAATGA
PROTEIN sequence
Length: 218
MRSLTVHRGLVAPLDRANVDTDAIIPKQFLKSIKRSGFGPNLFDEWRYLDRGEPGMDNSRRPPNPDFPLNQARYRGASVLLTRKNFGCGSSREHAPWALEDYGFRVIVAPSYADIFYNNCFKNGLLPVRLPEADVDWLFDQLNAFVGFELVVDLPQQQVRTVDGARSFGFEVDPFRKECLLGGLDEIGLTLRHADLIREFESKRLRDQPWLTTTLAE*