ggKbase home page
Advanced Search
Search Help

scnpilot_expt_750_bf_scaffold_897_9

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_68_35

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 8038..12291

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 999.99
  • Bit_score: 2383
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ06_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 999.99
  • Bit_score: 2383
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 999.99
  • Bit_score: 2377
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lautropia mirabilis → Lautropia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4254
ATGAAAGCATTGCTCGATCTGTTCAAGCAGGTCCAGGAAGAAGAGCATTTCGACGCGATCAAGATCGGGCTCGCCTCGCCCGAGAAGATCCGCTCGTGGTCGTTCGGCGAGGTCAAGAAGCCCGAGACGATCAACTACCGCACCTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCAAGATCTTCGGGCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTCATCTGCGAGAAGTGCGGCGTCGAGGTCACGCTGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCCAGCCCGGTGGCGCACATCTGGTTCCTCAAGTCGCTGCCGTCGCGCCTGGGCATGGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTCGAGGCGTTCGTGGTCATCGAGCCGGGCATGACGCCGCTCAAGCGCGGCCAGATCATGACCGAGGACGACTACCTCGCCAAGGTCGAGGAGCACGGCGACGAGTTCCGCGCCATGATGGGCGCCGAAGGCGTGCGCGAGCTGCTGCGCACCATCGACATCAACCGCGACATCGAGGCGCTGCGCAAGGATCTCGAGGCCACCGGCTCCGAGGCCAAGATCAAGAAGATCGCCAAGCGCCTGAAGGTGCTCGAGGGCTTCCAGCGTTCGGGCATCAAGCCCGACTGGATGGTCATGGAGGTGCTGCCGGTGCTGCCGCCCGAGCTGCGCCCGCTAGTGCCGCTGGACGGCGGGCGCTTCGCCACCTCCGACCTCAACGACCTGTACCGGCGCGTCATCAACCGCAACAACCGCCTCAAGCGCCTGCTCGAGCTCAAGGCGCCCGAGATCATCGTGCGCAACGAGAAGCGCATGCTGCAGGAGTCGGTCGACTCGCTGCTCGACAACGGGCGCCGCGGCAAGGCCATGACCGGCGCCAACAAGCGCGCGCTGAAGTCGCTCGCCGACATGATCAAGGGCAAGGGCGGGCGCTTCCGCCAGAACCTGCTCGGCAAGCGTGTCGACTACTCGGGCCGCTCGGTGATCGTGGTCGGCCCGCAGCTCAAGCTGCACCAGTGCGGGCTGCCCAAGCTGATGGCGCTGGAGCTGTTCAAGCCGTTCATCTTCAACAAGCTCGAGACGATGGGCGTGGCCACGACCATCAAGCAGGCCAAGAAGTACGTCGAGAGCCAGGAACCGATCGTCTGGGACATCCTCGAGGAGGTCATCCGCGAGCACCCGGTGCTGCTGAACCGCGCGCCGACGCTGCACCGGCTGGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAGGGCAAGGCGATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCGCTCGAGGCGCAGCTCGAGGCGCGCGCGCTCATGCTGGCCTCGAACAACGTGCTGTTCCCGTCCAACGGCGAGCCGTCGATCGTGCCGTCGCAGGACATCGTGCTGGGGCTGTACTACACCACGCGCGAGAAGATCAACGGCAAGGGTGAAGGCATGCTCTTCGCCGACGTCGGCGAGGTGCAGCGCGCCTACGACAACAGCCAGGTCGAGCTGGGCACGAAGATCGTGGTGCGGCTGGTCGAGTACACGCGCGACCGCGACACCGGCGAGACCGCGCCCCGTCCGATCCGCGTCGAGACCACCGTGGGCCGCGCCCTGCTCTCGGAGATCCTGCCCAAGGGGCTGCCCTTCGATCTGCTCAACCGGGCGCTGAAGAAGAAGGAGATCAGCCGCCTCATCAACGCCTCGTTCCGGCGCTGCGGCCTGCGCGATACCGTCATCTTCGCCGACCAGCTGATGCAGAACGGCTTCCGGCTGGCCACCCGGGCCGGCATCTCGATCGCCATCGACGACATGCTGGTGCCGGCGCAGAAGGCCGAGATCCTGGCGCAGGCCGAGAAGGAGGTGAAGGAGATCGAGCAGCAGTACACCTCGGGCCTGGTCACGCAGGGCGAACGCTACAACAAGGTGGTCGACATCTGGGGCCGTGCCGGCGACGACGTCGGCAAGGCCATGATGCGCCAGCTCGAGACCCAGACCGTCACCGACCGCCAGGGCAACCAGGCCAGGCAGGAGTCGTTCAACTCGATCTACATGATGGCCGACTCGGGCGCGCGCGGCTCGGCTGCGCAGATCCGCCAGCTGGCCGGCATGCGCGGCCTCATGGCCAAGCCCGACGGCTCGATCATCGAGACGCCGATCACGGCCAACTTCCGCGAGGGCCTGAACGTCCTGCAGTACTTCATCTCGACGCACGGCGCGCGCAAGGGCCTGGCCGACACGGCGCTCAAGACCGCCAACTCCGGCTACCTGACGCGCCGCCTGGTCGACGTCACCCAGGACCTGGTGGTCACCGAGGACGACTGCGGCACCAGCAACGGCGTGTCGATGAAGGCGCTGATCGAAGGCGGCGAGGTCATCGAGGCGCTGCGCGACCGCATCCTCGGGCGCGTGGCCGCGGTCGACGTGATCCACCCCGAGACGCAGGAAACGCTGTTCGAGGCCGGCACGCTGCTCGACGAGGACCGCGTCGAGGAGATCGGTCGCGTCGGCATCGACGAGGTGCGCGTGCGCACCCCGCTCACCTGCGAGACCCGCTACGGCCTGTGCGCCAAATGCTACGGGCGCGACCTCGGCCGCGGCGTGCTGGTCAACAGCGGCGAGGCGGTCGGGGTGATCGCCGCCCAGTCGATCGGCGAGCCCGGCACGCAGCTGACCATGCGCACCTTCCACATCGGCGGCGCGGCGTCGCGCGCGGCGGTGGCGAGCGCAGTCGAGGCGAAGTCCAATGGCACGGTGCGCTTCACCGCCACCATGCGCTACGTCACCAACGCCAAGGGCGAGCAGATCGTCATCTCGCGTTCGGGCGAGATCGTGATCGTCGACGACAACGGCCGCGAGCGCGAGCGCCACAAGGTGCCCTACGGCGCGACGCTGCTGGCGGTCGACGGCAAGGCGGTCAAGGCCGGAACGCAGGTGGCCACCTGGGATCCGCTGACGCGGCCGATCATCACCGAGTATTCCGGCACCATCCGCTTCGAGAACGTCGAGGAAGGCTCGACCGTGGCCAAGCAGATCGACGAGGTCACCGGCCTGTCGACGCTGGTCGTCATCGACGCCAAGCGGCGCGGCTCGACGGCCAAGTCGGTGCGCCCGCAGGTCAAGCTGATCAACGAGATGGGCGAGGAGGTCAAGATCGCCAACACCGACCACGCCGTCACCATCAGCTTCCCGGTCGGGGCGCTGATCACGGTGCGCGACGGCCAGCAGGTCGGCGTGGGCGAGATCCTCGCGCGCATCCCGCTCGAGTCGCAGAAGACGCGCGACATCACCGGCGGCCTGCCGCGGGTGGCCGAGCTGTTCGAGGCGCGCTCGCCGAAGGACGCCGGCATGCTCGCCGAGGTCACCGGCACCGTGTCGTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGGTCATCACCGACCTCGACGGCAACGCTCACGAGTTCCTGATCCCGAAGGACAAGAACGTGCTGGTGCACGACGGCCAGGTGGTGAACAAGGGCGAGATGATCGTCGACGGCCCGGCCGATCCGCACGACATCCTGCGCCTGCTCGGCATCGAGGCGCTGGCGCGCTACATCGTCGACGAGGTGCAGGACGTCTACCGGCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGCCGGGTGCAGGTCACCGACCCGGGCGATGCGCCGTTCATCACCGGCGAGCAGGTCGAGCGCTCCGAGATGCTGGACGAGAACGACAAGGCCATCGCCGCCGGCAAGCAGCCGGCCAGCTACATCAACCTGCTGCTGGGCATCACCAAGGCCTCGCTGTCGACCGACTCGTTCATCTCGGCGGCCTCGTTCCAGGAAACCACCCGGGTGCTCACCGAGGCGGCCATCATGGGCAAGCGCGACGAGCTGCGCGGGCTCAAGGAGAACGTGATCGTCGGGCGCCTGATTCCCGCGGGCACCGGGCTGGCCTACCACCGGGCACGGCGCGCCAAGGAGCAGAACGAGGCGCAGGAGCAGGCCGCGCTGGCTGCCGCGGAGGCGCTGTTCGAGCCGATGCCGGCGGGCGATGCCGAGGCCGAGGCCGAGACGACGACGCCGGGCGCTACGGCCGAGGGCGGCGAGTCTTAA
PROTEIN sequence
Length: 1418
MKALLDLFKQVQEEEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVIEPGMTPLKRGQIMTEDDYLAKVEEHGDEFRAMMGAEGVRELLRTIDINRDIEALRKDLEATGSEAKIKKIAKRLKVLEGFQRSGIKPDWMVMEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQESVDSLLDNGRRGKAMTGANKRALKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFIFNKLETMGVATTIKQAKKYVESQEPIVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARALMLASNNVLFPSNGEPSIVPSQDIVLGLYYTTREKINGKGEGMLFADVGEVQRAYDNSQVELGTKIVVRLVEYTRDRDTGETAPRPIRVETTVGRALLSEILPKGLPFDLLNRALKKKEISRLINASFRRCGLRDTVIFADQLMQNGFRLATRAGISIAIDDMLVPAQKAEILAQAEKEVKEIEQQYTSGLVTQGERYNKVVDIWGRAGDDVGKAMMRQLETQTVTDRQGNQARQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTSNGVSMKALIEGGEVIEALRDRILGRVAAVDVIHPETQETLFEAGTLLDEDRVEEIGRVGIDEVRVRTPLTCETRYGLCAKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASAVEAKSNGTVRFTATMRYVTNAKGEQIVISRSGEIVIVDDNGRERERHKVPYGATLLAVDGKAVKAGTQVATWDPLTRPIITEYSGTIRFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSTAKSVRPQVKLINEMGEEVKIANTDHAVTISFPVGALITVRDGQQVGVGEILARIPLESQKTRDITGGLPRVAELFEARSPKDAGMLAEVTGTVSFGKDTKGKQRLVITDLDGNAHEFLIPKDKNVLVHDGQVVNKGEMIVDGPADPHDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQVTDPGDAPFITGEQVERSEMLDENDKAIAAGKQPASYINLLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHRARRAKEQNEAQEQAALAAAEALFEPMPAGDAEAEAETTTPGATAEGGES*