ggKbase home page
Advanced Search
Search Help

scnpilot_expt_750_bf_scaffold_924_5

Organism: SCNPILOT_EXPT_750_BF_Betaproteobacteria_66_21

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 13 / 38
Location: comp(3377..7588)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 2518
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJE7_ACCPU similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 2518
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 2518
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Accumulibacter phosphatis → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4212
ATGAAAGCACTACTTGATCTGTTCAAGCAGGTAACGCAGGAAGAAGAGTTCGACGCGATCACCATCGGTCTCGCGTCGCCGGACAAAATCCGTTCCTGGTCCTACGGCGAAGTCAAAAAGCCGGAAACCATCAACTACCGTACCTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCAAGATCTTCGGGCCGGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCATCGCGGCGTGATCTGCGAGAAGTGCGGCGTCGAAGTCACGCTGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCCTCGCCGGTCGCCCACATCTGGTTCCTGAAGAGCCTGCCGAGCCGTCTCGGTATGGTCCTCGACATGACCCTGCGCGACATCGAACGCGTGCTCTACTTCGAAGCCTTCGTCGTTTGCGACCCGGGCATGACGCCGCTCAACCGCGGTCAACTGCTGACCGAGGACGATTACCTCGCGAAGACCGAGGAGTACGGCGACGACTTCTTCGCGGCGATGGGCGCCGAAGGCATCCGCGAACTGCTGCGCAACCTCGACCTCGACAACGAAGTCGACCGCCTGCGCGGCGAACTCGAGACGACGACGTCCGAGACCAAGAACAAGAAGCTGGCCAAGCGCCTGAAGATCCTCGAAGGCTTCCAGAAGTCCGGCATCAAGCCCGACTGGATGGTGCTCGAAGTGTTGCCGGTGCTGCCGCCCGACCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTCGCGACCTCCGATCTGAACGATCTCTACCGCCGCGTCATCAACCGTAACAACCGTCTGAAGCGTCTGCTCGAACTGAAGGCACCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCCGTCGACTCGCTGCTCGACAACGGCCGCCGCGGCAAGGCGATGACCGGCGCCAACAAGCGTCCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGGGCGGTCGTTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGTTCGGTCATCGTCGTCGGCCCGCAGCTCAAGCTGCACCAGTGCGGCCTGCCGAAGCTGATGGCGCTCGAACTGTTCAAGCCCTTCATCTTCAACCGCCTGGAAATGATGGGTCTGGCGACGACCATCAAGCAGGCCAAGAAGATGGTCGAAACCGAAGAACCGGTGGTCTGGGACATCCTCGAAGAGGTGATCCGCGAGCACCCGATCATGCTCAACCGCGCGCCGACGCTGCACCGCCTCGGTATCCAGGCCTTCGAGCCGACCCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTCGTCTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTCCACGTCCCGCTGTCGCTCGAAGCGCAGATGGAAGCCCGCACCCTGATGCTGGCCTCCAACAACGTGCTGTCGCCCGCCAACGGCGAGCCGATCATCGTCCCGTCGCAGGATATCGTTCTCGGTCTCTACTACGCGACCCGTGAGCGCATCAACGCCAAGGGCGAAGGAATGATCTTCCCCGACCTGGCCGAAATCCAGCGCGCCATGCAGGCCGGCGAACTCGACATCCATGCCAAGATCTCGGTGCGCATCAAGGAGTACGAGAAGGACGGCGAGAACGGCTGGAAGGAAAAGGTCACCCGCTACGACACGACCGCCGGCCGCGCGCTGCTTTCGGAAATCCTGCCCAAGGGGCTGCCGTTCAGCGTCCTCGACAAGCCGCTGAAGAAGAAGGAAATCTCCAAGCTGATCAACACGGCCTTCCGCCGTTGCGGCCTCAAGGAAACCGTCGTCTTCGCCGACCAGCTGATGCAGAACGGCTATCGCCTGGCGACCCGCGCCGGCATCTCGTTCTGCTCGGACGACATGCTCGTTCCGACGCAGAAGCGTGAAATCATCGCCGCCGCCGAAGACGAAGTGAAGGAAATCGAGAGCCAGTACACCAACGGTCTCGTGACCTTCGGCGAACGCTACAACAAGGTCGTCGACATCTGGGGTCGTACCGGCGACCAGGTTGCCAAGGTGATGATGGAGCAGCTCGGTCACGAGGAAGTGATCGACCGCCACGGCAAGAAGGTGAAGCAGGAATCCTTCAACTCGATCTACATGATGGCCGACTCCGGCGCCCGCGGTTCCGCGGCGCAGATCCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCGAAACCGGACGGCTCGATTATCGAGACGCCGATCACCACGAACTTCCGCGAAGGTCTGAACGTTCTCCAGTACTTCATCTCGACGCACGGCGCCCGTAAAGGTCTGGCCGACACCGCGCTGAAGACCGCGAACTCGGGTTACCTGACGCGCCGTCTGGTCGACGTGACGCAGGATCTGGTCGTCATCGAGGACGACTGCGGCACGCAGAACGGCGTCACGATGAAGGCGCTGATCGAGGGCGGCGAAGTGATCGAAGCCCTGCGCGAACGTATCCTCGGCCGCGTCACGGTGAATGACCTGGTCAATCCCGAAACCGACGAAACGGTGATCGAAGCCGGCACGCTGGTGGACGAGGACTGCTGCGACCTGATCGACCAGCTCGGCATCGACGAAGTCAAGGTGCGCACGCCGCTCACCTGCGATACGCGCTACGGCTTGTGCGGCAAGTGCTACGGCCGCGATCTTGGCCGCGGCACGCCGGTCAACGTCGGCGAAGCGGTTGGCGTCATCGCCGCCCAGTCGATCGGCGAACCGGGCACCCAGCTCACGATGCGGACCTTCCACGTCGGCGGCGCGGCTTCCCGTGCCGCGGTGGCCAGCCAGGTCGACAGCAAGAGCGCCGGTATCGTGCGCTTCACCGCGTCGATGCGTTACGTCACGAGCGCCAAGGGCGAGAAGATCGTCATCACCCGTTCCGGCGAAGTCCTCGTCACCGACGACAACGGCCGCGAGCGCGAGCGTCACAAGGTGCCGTACGGTGCCACGCTGCAGGTCACCGACGGACAGTCCGCGAAGGCCGGCACCAAGCTCGCGACCTGGGATCCGCACACCCGGCCGATCATCGCCGAATATTCGGGCCTGGTGCGTTTCGAGAACGTCGAAGAAGGCGTTACCGTCGCCAAGCAGATCGATGAAGTGACCGGCCTGTCGACGCTGGTCGTCATCGACCACAAGCGCGGCGGCAAGATGCAGTCGAAGGGGCTGCGTCCGCAGGTCAAGCTGCTCGATGCCAACGGCGACGAAGTCAAGATGCACGGTTCCGACCACACGGTGACCATCACCTTCCAGGTCGGCACCATCATCACCGTGCTCGACGGCCAGCAGGTCTCGGTCGGCGACGTGCTGGCACGTCTGCCGCAGGAATCGGCCAAGACGCGCGACATCACCGGCGGCCTGCCGCGGGTGGCGGAGCTGTTCGAGGCCCGTACCCCGAAGGACGCCGGCATGCTGGCCGAGTACACCGGCACCGTTTCCTTCGGCAAGGACACCAAGGGCAAGCAGCGTCTGGTCATCACCGACCTTGACGGCGTCGCTCACGAGTACCTGATTCCGAAGGACAAGCACGTTCTGGTGCACGACGGCCAGGTGGTCAACAAGGGCGAGTCGATCGTGGACGGCGAACCCGATCCGCACGACATCCTGCGTCTGCAGGGCGTCGAGGCGCTGGCCATCTACATCACCGACGAAGTGCAGGACGTGTACCGTCTTCAGGGCGTGAAGATCAACGACAAGCACATCGAAGTGATCGTTCGCCAGATGCTGCGCCGCGTCGCTATTGTCGATCCGGGCGATACCCGCTTCATCAAGAGCGAGCAGGTCGAGCGCGCCCACGTGCTTGACGAGAACGATCGCGTGCTGGCCGAGGGCAAGCTCCCGGCGGTCTACGAGTACGTCCTGCTCGGTATTACCAAGGCGTCGTTGTCGACCGATTCGTTCATCTCTGCGGCGTCCTTCCAGGAAACCACCCGCGTGTTGACCGAAGCGGCGATCATGGGCAAGCGCGACGAACTCCGCGGTCTCAAGGAGAACGTCATCGTCGGTCGTCTGATTCCCGCCGGCACCGGTCTCGCCTACCATACGACGCGCAAGAAGCAGGCGGTCGGCGAGGATATCGCCAGTCGTCCGGGGATCGTCGGCGACGAGGCAGCTGTCGTTGTCGAGGATTCGCAGGATCCCCAAGTCGGTTGA
PROTEIN sequence
Length: 1404
MKALLDLFKQVTQEEEFDAITIGLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVCDPGMTPLNRGQLLTEDDYLAKTEEYGDDFFAAMGAEGIRELLRNLDLDNEVDRLRGELETTTSETKNKKLAKRLKILEGFQKSGIKPDWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFIFNRLEMMGLATTIKQAKKMVETEEPVVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATRERINAKGEGMIFPDLAEIQRAMQAGELDIHAKISVRIKEYEKDGENGWKEKVTRYDTTAGRALLSEILPKGLPFSVLDKPLKKKEISKLINTAFRRCGLKETVVFADQLMQNGYRLATRAGISFCSDDMLVPTQKREIIAAAEDEVKEIESQYTNGLVTFGERYNKVVDIWGRTGDQVAKVMMEQLGHEEVIDRHGKKVKQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTQNGVTMKALIEGGEVIEALRERILGRVTVNDLVNPETDETVIEAGTLVDEDCCDLIDQLGIDEVKVRTPLTCDTRYGLCGKCYGRDLGRGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAVASQVDSKSAGIVRFTASMRYVTSAKGEKIVITRSGEVLVTDDNGRERERHKVPYGATLQVTDGQSAKAGTKLATWDPHTRPIIAEYSGLVRFENVEEGVTVAKQIDEVTGLSTLVVIDHKRGGKMQSKGLRPQVKLLDANGDEVKMHGSDHTVTITFQVGTIITVLDGQQVSVGDVLARLPQESAKTRDITGGLPRVAELFEARTPKDAGMLAEYTGTVSFGKDTKGKQRLVITDLDGVAHEYLIPKDKHVLVHDGQVVNKGESIVDGEPDPHDILRLQGVEALAIYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVAIVDPGDTRFIKSEQVERAHVLDENDRVLAEGKLPAVYEYVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHTTRKKQAVGEDIASRPGIVGDEAAVVVEDSQDPQVG*