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scnpilot_expt_750_bf_scaffold_373_275

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 50 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(296226..296924)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTF7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 220.0
  • Bit_score: 250
  • Evalue 1.60e-63
Rhomboid family protein {ECO:0000313|EMBL:KFC73268.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 231.0
  • Bit_score: 369
  • Evalue 2.60e-99
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 225.0
  • Bit_score: 234
  • Evalue 2.60e-59

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGTTCGTCCCGATCTACGATGGGGTTCCCCTGCGCTTCACCCGCTCGGCCTTCGTGACCTACGGGCTGATCGCGGCATGCACGTTGTTCCAGCTCGCGCTCAGCTTCGGGCCGCATCGGGAGAACGACATCGCGGTTCTCGCCGGCTTCGGCCTGATTCCCTCGGTGCTCTTCGGCGCGGCGCAGCTGCCCGAAGGTCTCGCCCATGCGCCCCCTTGGCTCACGCTGTTCAGCAACATCCTGCTGCACGCCAGCTTTGCGCATCTGCTCGGCAACATGCTGTTCCTCTGGGTCTTCGGCGACAACGTCGAGGATGCGATGGGCCATGCCCGCTTTCTCGCTTTCTTCTTCCTGTGCGGTCTCGGCGGGTCGCTGGCCCATGCGCTGGCCAATCCGGACTCCGAGCAGCCTCTGGTCGGGGCTTCCGGCGCGATCTCGGGGGTGATCGCGGCCTATCTCATGCTTTACCCGCGCGTCCGCGTCTGGGGGCTCGCCTTCAAGTGGATCCCGGTGCATGTCCCGGCCGTCTACACCCTCGGCGGCTGGATCCTGTTCCAGGCTGCCTCGGCCTGGTTCGATCCGCAGGGCAATATCGGCTGGTGGGCCCATCTCGGCGGTCTCGCCACCGGGGCGGCATTGACGCCGCTTTTCATCCGGCGCGGCGTCCGCCTGTTCGGGCGGCGGATAGCCGGGTCGTGA
PROTEIN sequence
Length: 233
MFVPIYDGVPLRFTRSAFVTYGLIAACTLFQLALSFGPHRENDIAVLAGFGLIPSVLFGAAQLPEGLAHAPPWLTLFSNILLHASFAHLLGNMLFLWVFGDNVEDAMGHARFLAFFFLCGLGGSLAHALANPDSEQPLVGASGAISGVIAAYLMLYPRVRVWGLAFKWIPVHVPAVYTLGGWILFQAASAWFDPQGNIGWWAHLGGLATGAALTPLFIRRGVRLFGRRIAGS*