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scnpilot_expt_750_bf_scaffold_1293_8

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 50 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 5963..6277

Top 3 Functional Annotations

Value Algorithm Source
integration host factor subunit alpha n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E38615 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 102.0
  • Bit_score: 168
  • Evalue 3.70e-39
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1502851 species="Bacteria; Proteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 104.0
  • Bit_score: 196
  • Evalue 1.80e-47
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 163
  • Evalue 2.60e-38

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGTCGGGGCAAACGGTGACTCGCGCGGATTTGTGCGAGGCTGTCTACCAGAAGATCGGGCTGTCGCGGACTGAGGCGTCGAAACTGGTCGAGACCGTGCTCGACGAGATCTGCGATGCGGTCGCCCGTGGGGAAAACGTCAAGTTGTCCTCCTTCGGTTCGTTCGTCGTGCGAGACAAGGGCGAGCGAATCGGGCGTAATCCCAAGACGGGTGTCGAGGTCCCCATCGAGCCGCGGCGTGTGATGGTGTTCAAGCCCTCGAACGTGATGAAGGCCCGCATCAACGGGCAGTTGGGTGAGGGTGAGGCTGAGTGA
PROTEIN sequence
Length: 105
MSGQTVTRADLCEAVYQKIGLSRTEASKLVETVLDEICDAVARGENVKLSSFGSFVVRDKGERIGRNPKTGVEVPIEPRRVMVFKPSNVMKARINGQLGEGEAE*