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scnpilot_expt_750_bf_scaffold_467_1

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2..433)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAU3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 140.0
  • Bit_score: 115
  • Evalue 3.90e-23
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 140.0
  • Bit_score: 115
  • Evalue 1.10e-23
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEW00286.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 140.0
  • Bit_score: 115
  • Evalue 5.50e-23

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 432
ATGATGGAGCATGAAAGTTTAGTTGAATTATACCGGGAAGTCTTTCCCGAAGCAGCGCGTTTAATAAAGCGTTTAGGTGGAAACCTGGAAGAAGCGAAAGATGCCTTTCATGATGCACTATTGATATATCTTGAAAGAGAAGCAAAAGGTACATTGCAAATTCATACTTCAGCAAAAGCATATTTGCTGGGCACTGCCAAAATACTTTGGCTTCATGCTAAAGATCAATATTTCGATCCGTTGCCGGAAGATGTTGAAGCATTTGTTGATGAAGAAAATGAAGCTGCTGATGAACATAAAAATGTTTTTCACTACTTATTGTTGGCAGGACAAAAATGTTTGCACATGCTTAAAGCATTTTATTACGATAATCTTTCGCTTCAACAAATCGCTGCAGGTTTTGGTTTCAACGGAGTTCGTTCGGCAACAGTA
PROTEIN sequence
Length: 144
MMEHESLVELYREVFPEAARLIKRLGGNLEEAKDAFHDALLIYLEREAKGTLQIHTSAKAYLLGTAKILWLHAKDQYFDPLPEDVEAFVDEENEAADEHKNVFHYLLLAGQKCLHMLKAFYYDNLSLQQIAAGFGFNGVRSATV