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scnpilot_expt_750_bf_scaffold_1832_8

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5881..6180)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Empedobacter brevis RepID=UPI00035F5A63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 195
  • Evalue 2.70e-47
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 92.0
  • Bit_score: 159
  • Evalue 6.00e-37
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK34684.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chry similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 92.0
  • Bit_score: 159
  • Evalue 3.00e-36

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Taxonomy

Chryseobacterium gleum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCATTTGGAAAACACATAAAAAGACTAAGAGAAAGTAAAGGATTGTTCCTACGGGAAGTTGGGGCTGCATTGGAACTGGATAGTGCTTTTATCAGTAAAGTCGAAAATGAAGAAAGACCATTGCCAAGAAAACACATCGAAAAGCTTGCAGAATTTTTGAATACCCCAATTGATGAGCTATTGGTTTTATGGTTTTCAGATAAAATAAAGGGACTTATTGACGATAAAGAAATAGGAAAGCAGGCTTTAAAAATTGTTTTAAAAGAATTAAATGCAATCAAGAATAATGCAGATTAG
PROTEIN sequence
Length: 100
MAFGKHIKRLRESKGLFLREVGAALELDSAFISKVENEERPLPRKHIEKLAEFLNTPIDELLVLWFSDKIKGLIDDKEIGKQALKIVLKELNAIKNNAD*