ggKbase home page

cg_0.2_sub10_scaffold_188_c_6

Organism: CG1_02_SUB10_Thiomicrospira_44_157_curated

near complete RP 46 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 2
Location: comp(5677..6294)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=CG_Thiomicrospira_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 413
  • Evalue 1.40e-112
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RLME_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 205.0
  • Bit_score: 342
  • Evalue 2.80e-91
  • rbh
ribosomal RNA methyltransferase RrmJ/FtsJ similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 205.0
  • Bit_score: 342
  • Evalue 7.90e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Thiomicrospira_01 → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGCAAAAAGCAAATCCAGTAACAATTGGTTAAAAGAACATTTTGATGATTATTACGTTCATAAAGCCAAGCAAGAAGGTTGGCGATCCCGAGCGATCTATAAGCTTCAAGAGATTGATGAAAAAGATAGGTTGTTTCATTCAGGGATGACGGTTATCGATTTAGGCGCCGCACCAGGGGGATGGTCACAATGGACGGCACAAAAAATTGGTGAAAATGGGCAGGTTTTTGCATTAGACATTCTTCCGGTCGAACCCTATGCCGGGGTAACCTTTGTACAAGGCGACTTTCAAGAGGAGTCAGTTTATAATAGCCTGCTTGAGGCATTGGCTGATAGAGAAGTTGATTTGGTTATGTCAGATATGGCGCCCAATATGACCGGCAACAAAGGCATTGATACGCCAAGATCCATGTACTTGGTTGAGTTAACGATGGATTTAGCACAACAAGTTTTAAAGCCCAAAGGGACTTTGTTGATGAAAGTATTTCAAGGTACAGGCTATGATCAACTCTTGAAAACGCTTCGACAAGACTATACTAAAGTGTTAGTGCGTAAGCCAAAAGCCTCACGATCTCGCAGTAAGGAAGTTTACCTTCTTGCCCAAGGGAAAAAATAG
PROTEIN sequence
Length: 206
MAKSKSSNNWLKEHFDDYYVHKAKQEGWRSRAIYKLQEIDEKDRLFHSGMTVIDLGAAPGGWSQWTAQKIGENGQVFALDILPVEPYAGVTFVQGDFQEESVYNSLLEALADREVDLVMSDMAPNMTGNKGIDTPRSMYLVELTMDLAQQVLKPKGTLLMKVFQGTGYDQLLKTLRQDYTKVLVRKPKASRSRSKEVYLLAQGKK*