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cg_0.2_sub10_scaffold_398_c_13

Organism: CG1_02_SUB10_Thiomicrospira_44_157_curated

near complete RP 46 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 2
Location: 11335..12225

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ1_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 281.0
  • Bit_score: 448
  • Evalue 4.00e-123
sigma 32 (RpoH); K03089 RNA polymerase sigma-32 factor Tax=CG_Thiomicrospira_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 581
  • Evalue 5.60e-163
sigma 32 (RpoH) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 281.0
  • Bit_score: 448
  • Evalue 1.10e-123

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Taxonomy

CG_Thiomicrospira_01 → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGACAAATGCACTTCATTCAAAAAACCTACTCATGCCGATGGTTCATAATCTGGCACCCGGGCAAAACATTGAAAGCTACTTGAGAACGGTGCAATCCCTTCCTCAATTAAGCGCCCAAGAAGAAATGTCACTGGCTGAAAAACTGTATTATCATGCCGATCTTGAAGCAGCAAGACAATTGATTCTATCTTCATTGCGCTATGTCGTGCCGATTGCACGGACATATAAAGGGTATGGCTTGCCACTCAGTGACCTTATCCAAGAAGGCAATATCGGCCTTATGAAAGCGGTAAAACGATTTAACCCAAATGAAAAGGTACGCTTAATGACATTCGCCGTGCATTGGGTTCGTGCGGAAATTAATGAATTTGTCATTAAAAATTGGCGCATTGTGAAAACGGCAACCACCAAAGCGCAGCGTAAACTCTTTTTTAAACTGAGAAGCACAAAGAAAAACCTGGGGTGGTTTAGTGACAAAGATGCCGATAGCGTCGCGAAAGAATTAGGCGTCACCCGCAAAGATGTTTTAGAAATGGAAACCCGCTTATACGGACAGGATATGTCGGTTGATTTAAGTGCGGACGAAGAAGAAAATAGCGGCAAAACTTACCCTATATTAGCCAGCCAGTCGCTTGACCCTGAAGCGCAACTGATTAAAGATACCCAAACAGACTTTGATCACAAGCAGTTACATCAGGCATTGAAGCAATTGGATCAGCGCAGCCGCGACATTTTACAACAACGTTGGCTATCAGATGATAAGGTTGGCTTGAAAGCCCTGTCTGAACAATATCAAGTTTCAATGGAACGCATTCGCCAAATCGAGAAACAAGCCATGAAAAAGTTGCAACTTGCCATGAGCGGTACTCCAGCACAAACTTGCTCATAG
PROTEIN sequence
Length: 297
MTNALHSKNLLMPMVHNLAPGQNIESYLRTVQSLPQLSAQEEMSLAEKLYYHADLEAARQLILSSLRYVVPIARTYKGYGLPLSDLIQEGNIGLMKAVKRFNPNEKVRLMTFAVHWVRAEINEFVIKNWRIVKTATTKAQRKLFFKLRSTKKNLGWFSDKDADSVAKELGVTRKDVLEMETRLYGQDMSVDLSADEEENSGKTYPILASQSLDPEAQLIKDTQTDFDHKQLHQALKQLDQRSRDILQQRWLSDDKVGLKALSEQYQVSMERIRQIEKQAMKKLQLAMSGTPAQTCS*