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scnpilot_expt_750_p_scaffold_494

Search features with annotation key words

Displaying items 31-60 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_494_31
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30216..31448
DNA (1233bp) protein (411aa)
Putative hydroxylase n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TNL3_9ACTO rbh
Putative hydroxylase {ECO:0000313|EMBL:GAB35071.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.;"
conserved protein of unknown function
scnpilot_expt_750_p_scaffold_494_32
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31514..32515)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V8A0_9MICC rbh
Uncharacterized protein {ECO:0000313|EMBL:EMY34483.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
hypothetical protein rbh
scnpilot_expt_750_p_scaffold_494_33
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32518..33759)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036043E8
Uncharacterized protein {ECO:0000313|EMBL:KBZ61035.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
acyl-CoA dehydrogenase type 2
scnpilot_expt_750_p_scaffold_494_34
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33870..34577)
DNA (708bp) protein (236aa)
Short-chain dehydrogenase/reductase SDR id=7721093 bin=CNBR_ACT species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Short-chain dehydrogenase {ECO:0000313|EMBL:EYR64102.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
short-chain dehydrogenase/reductase SDR
scnpilot_expt_750_p_scaffold_494_35
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34750..36174
DNA (1425bp) protein (475aa)
Putative Hydrolase Cytosine deaminase-like metal-dependent hydrolase id=7721091 bin=CNBR_ACT species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hydrolase; Cytosine deaminase-like metal-dependent hydrolase
Putative Hydrolase Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:CCH88799.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobac
scnpilot_expt_750_p_scaffold_494_36
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36252..37388
DNA (1137bp) protein (379aa)
MDR-like permease n=1 Tax=Brevibacterium casei S18 RepID=K9B4S5_9MICO
MDR-like permease {ECO:0000313|EMBL:EKU48785.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
major facilitator superfamily protein
scnpilot_expt_750_p_scaffold_494_37
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37512..38888
DNA (1377bp) protein (459aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000375D36B rbh
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KHK97453.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi
scnpilot_expt_750_p_scaffold_494_38
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38906..39388
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL27954.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_expt_750_p_scaffold_494_39
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39404..40513)
DNA (1110bp) protein (370aa)
butanediol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003497536
Uncharacterized protein {ECO:0000313|EMBL:EPD69540.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
2,3-butanediol dehydrogenase, R-alcohol forming, - and -acetoin-specific
scnpilot_expt_750_p_scaffold_494_40
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40606..40992
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Caenorhabditis remanei RepID=E3NPA6_CAERE
Putative RutC family protein YjgH {ECO:0000313|EMBL:CDJ99699.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
endoribonuclease L-PSP
scnpilot_expt_750_p_scaffold_494_41
unknown

Not on your lists

comp(40944..41060)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_494_42
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41060..42379)
DNA (1320bp) protein (440aa)
Peptidase, M24 family n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SAS6_9ACTO rbh
Aminopeptidase {ECO:0000313|EMBL:EYR64095.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
peptidase M24
scnpilot_expt_750_p_scaffold_494_43
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42382..43317)
DNA (936bp) protein (312aa)
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0QZZ8_9MICO rbh
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:EYR64096.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
6-phosphogluconate dehydrogenase, NAD-binding
scnpilot_expt_750_p_scaffold_494_44
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43402..43869)
DNA (468bp) protein (156aa)
2-aminomuconate deaminase
Deaminase {ECO:0000313|EMBL:EYR64091.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
endoribonuclease; K07567 TdcF protein id=1246927 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
scnpilot_expt_750_p_scaffold_494_45
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43866..45515)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YZ19_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD67240.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
TIM-barrel fold metal-dependent hydrolase
scnpilot_expt_750_p_scaffold_494_46
Candidatus Aquiluna sp. IMCC13023, Candidatus Aquiluna, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45631..46668)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0QZZ9_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EIC91185.1}; TaxID=1081644 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Luna cluster; Luna-1 subcluster; Candidatus Aquiluna.;" source
LacI family transcriptional regulator
scnpilot_expt_750_p_scaffold_494_47
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46714..47778)
DNA (1065bp) protein (355aa)
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB {ECO:0000313|EMBL:EPR76313.1}; EC=2.1.1.- {ECO:0000313|EMBL:EPR76313.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteri
tRNA/rRNA methyltransferase (EC:2.1.1.-)
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XJX9_9MICO
scnpilot_expt_750_p_scaffold_494_48
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47775..49184)
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3P3_9MICO
scnpilot_expt_750_p_scaffold_494_49
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49207..50319)
DNA (1113bp) protein (371aa)
Bifunctional enzyme IspD/IspF {ECO:0000255|HAMAP-Rule:MF_01520}; Includes:; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_01520}; EC=2.7.7.60 {ECO:0000255|HAMAP-R
Bifunctional enzyme IspD/IspF id=7721082 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
scnpilot_expt_750_p_scaffold_494_50
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50399..50881)
DNA (483bp) protein (161aa)
CarD family transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B49AB1
Transcriptional regulator, CarD-like regulator {ECO:0000313|EMBL:EAR24940.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
transcriptional regulator, CarD-like regulator
scnpilot_expt_750_p_scaffold_494_51
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50939..51418
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIG6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR24941.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_494_52
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51435..52112)
DNA (678bp) protein (226aa)
XRE family transcriptional regulator n=1 Tax=Microbacteriaceae RepID=UPI000362D84A
Sensory transduction protein RegX3 {ECO:0000313|EMBL:ERK70365.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.
two-component system regulatory protein
scnpilot_expt_750_p_scaffold_494_53
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52109..53266)
DNA (1158bp) protein (386aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="
Putative signal-transduction histidine kinase senX3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP62_LEIAQ
two-component system sensor protein
scnpilot_expt_750_p_scaffold_494_54
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53426..54079
DNA (654bp) protein (218aa)
PhoU family transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A2405
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" sourc
phoU; phosphate transport system regulator
scnpilot_expt_750_p_scaffold_494_55
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54133..54876)
DNA (744bp) protein (248aa)
gpmA; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Z4_9MICO
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
scnpilot_expt_750_p_scaffold_494_56
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54944..55873
DNA (930bp) protein (310aa)
Exopolyphosphatase {ECO:0000313|EMBL:KJL23956.1}; EC=3.6.1.11 {ECO:0000313|EMBL:KJL23956.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTX2_9MICO
exopolyphosphatase
scnpilot_expt_750_p_scaffold_494_57
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55870..56694
DNA (825bp) protein (275aa)
Uncharacterized protein id=7721065 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_101, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01966.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
scnpilot_expt_750_p_scaffold_494_58
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56756..59104
DNA (2349bp) protein (783aa)
ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002E3E443 rbh
Excinuclease ATPase subunit {ECO:0000313|EMBL:CDK01893.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
excinuclease ATPase subunit
scnpilot_expt_750_p_scaffold_494_59
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59114..59761)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003829D1B
Uncharacterized protein {ECO:0000313|EMBL:ERK70918.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_494_60
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59850..61490
DNA (1641bp) protein (547aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3DLQ6_9ACTO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMF30910.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus
ABC transporter ATP-binding protein
Displaying items 31-60 of 117 in total

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