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scnpilot_expt_750_p_scaffold_494

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_494_1
unknown

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_494_2
Burkholderia sp. DNT, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145..1758
DNA (1614bp) protein (538aa)
4-methyl-5-nitrocatechol monooxygenase n=1 Tax=Burkholderia sp. DNT RepID=Q2PWU9_9BURK rbh
4-methyl-5-nitrocatechol monooxygenase {ECO:0000313|EMBL:ABC00744.1}; TaxID=233098 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
monooxygenase FAD-binding
scnpilot_expt_750_p_scaffold_494_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1853..3010)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036581A4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38147.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_p_scaffold_494_4
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3214..4200
DNA (987bp) protein (329aa)
Transcriptional regulator, AraC-family n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LI32_RALME
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:ELA00226.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
scnpilot_expt_750_p_scaffold_494_5

Not on your lists

comp(4231..5214)
DNA (984bp) protein (328aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=uncultured bacterium RepID=C6KUW9_9BACT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:BAH89767.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
livH; branched chain amino acid ABC transporter permease
scnpilot_expt_750_p_scaffold_494_6
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5211..6113)
DNA (903bp) protein (301aa)
Putative ABC branched chain amino acid family transporter, inner membrane subunit n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SPE9_9BRAD
Putative ABC branched chain amino acid family transporter, inner membrane subunit {ECO:0000313|EMBL:CCD96076.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brady
ABC transporter permease
scnpilot_expt_750_p_scaffold_494_7
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6133..7362)
DNA (1230bp) protein (410aa)
Uncharacterized protein id=7720638 bin=CNBR_ACT species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEZ03421.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source=
extracellular ligand-binding receptor
scnpilot_expt_750_p_scaffold_494_8
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7431..8939)
DNA (1509bp) protein (503aa)
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily (Modular protein) id=7720641 bin=CNBR_ACT species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACK86098.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_expt_750_p_scaffold_494_9
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9150..10202
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B4F82A
decarboxylase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_expt_750_p_scaffold_494_10
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10328..10732
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Cladophialophora carrionii CBS 160.54 RepID=V9DMB8_9EURO
Cupin 2 domain-containing protein
Cupin 2 domain-containing protein {ECO:0000313|EMBL:AHF79387.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis
scnpilot_expt_750_p_scaffold_494_11
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10729..12309
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PV24_9ACTO
p-cresol methylhydroxylase {ECO:0000313|EMBL:KDA05319.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
FAD linked oxidase domain-containing protein
scnpilot_expt_750_p_scaffold_494_12
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

12460..13170
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECW2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82524.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
scnpilot_expt_750_p_scaffold_494_13
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13544..14662)
DNA (1119bp) protein (373aa)
Putative zinc-containing alcohol dehydrogenase n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KE00_9ACTO rbh
Putative zinc-containing alcohol dehydrogenase {ECO:0000313|EMBL:GAC46721.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis
putative zinc-containing alcohol dehydrogenase
scnpilot_expt_750_p_scaffold_494_14
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14659..15510)
DNA (852bp) protein (284aa)
acetoin dehydrogenase n=1 Tax=Mycobacterium abscessus RepID=UPI000311DDE6
Short-chain dehydrogenase {ECO:0000313|EMBL:KDA05327.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
oxidoreductase
scnpilot_expt_750_p_scaffold_494_15
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15507..16322)
DNA (816bp) protein (272aa)
acetoin dehydrogenase n=1 Tax=Mycobacterium abscessus RepID=UPI000311DDE6
Short-chain dehydrogenase {ECO:0000313|EMBL:KDA05327.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
oxidoreductase
scnpilot_expt_750_p_scaffold_494_16
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16327..17724)
DNA (1398bp) protein (466aa)
Mitomycin radical oxidase id=7720351 bin=CNBR_ACT species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
mcrA; Mitomycin radical oxidase
Mitomycin radical oxidase {ECO:0000313|EMBL:AFE09369.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="C
scnpilot_expt_750_p_scaffold_494_17
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17765..19333)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PV24_9ACTO
p-cresol methylhydroxylase {ECO:0000313|EMBL:KDA05319.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
glycolate oxidase
scnpilot_expt_750_p_scaffold_494_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19330..20037)
DNA (708bp) protein (236aa)
Carboxymuconolactone decarboxylase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VX92_9ACTO
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein {ECO:0000313|EMBL:EXG81632.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; C
carboxymuconolactone decarboxylase
scnpilot_expt_750_p_scaffold_494_19
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20039..20926)
DNA (888bp) protein (296aa)
6-phosphogluconate dehydrogenase n=1 Tax=Glaciibacter superstes RepID=UPI0003B5E0F0 rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KJC64839.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
3-hydroxyisobutyrate dehydrogenase rbh
scnpilot_expt_750_p_scaffold_494_20
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20926..21333)
DNA (408bp) protein (136aa)
4-carboxymuconolactone decarboxylase n=2 Tax=Gordonia RepID=H5TNK7_9ACTO
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KJC64840.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
carboxymuconolactone decarboxylase
scnpilot_expt_750_p_scaffold_494_21
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21380..22270)
DNA (891bp) protein (297aa)
6-phosphogluconate dehydrogenase, NAD-binding protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W0A4_9ACTO rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KJC64842.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
6-phosphogluconate dehydrogenase, NAD-binding protein
scnpilot_expt_750_p_scaffold_494_22
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22267..23079)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B46EF1 rbh
beta-lactamase domain-containing protein rbh
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AGZ41416.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes fri
scnpilot_expt_750_p_scaffold_494_23
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23082..24026)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036B0991
Uncharacterized protein {ECO:0000313|EMBL:KFL46021.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_expt_750_p_scaffold_494_24
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24091..24927)
DNA (837bp) protein (279aa)
Putative oxidoreductase n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KCV7_9ACTO rbh
Putative oxidoreductase {ECO:0000313|EMBL:GAB33588.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.;"
short-chain dehydrogenase/reductase SDR
scnpilot_expt_750_p_scaffold_494_25
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25097..25813
DNA (717bp) protein (239aa)
GntR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6A99E
GntR family transcriptional regulator {ECO:0000313|EMBL:KJC64838.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
GntR family transcriptional regulator
scnpilot_expt_750_p_scaffold_494_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25856..26173
DNA (318bp) protein (106aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTE6_LEIAQ
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ERK72051.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 146
scnpilot_expt_750_p_scaffold_494_27
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26234..26899
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NDB7_9ACTO
GntR family transcriptional regulator {ECO:0000313|EMBL:KJC64838.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
gntR; GntR domain-containing protein
scnpilot_expt_750_p_scaffold_494_28
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27035..28396
DNA (1362bp) protein (454aa)
Aminomethyltransferase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MZP0_SACVD
aminomethyltransferase
Aminomethyltransferase {ECO:0000313|EMBL:ACU98269.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (str
scnpilot_expt_750_p_scaffold_494_29
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28542..29642
DNA (1101bp) protein (367aa)
Putative zinc-containing alcohol dehydrogenase n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KE00_9ACTO
Putative zinc-containing alcohol dehydrogenase {ECO:0000313|EMBL:GAC46721.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis
alcohol dehydrogenase zinc-binding domain-containing protein
scnpilot_expt_750_p_scaffold_494_30
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29665..30132)
DNA (468bp) protein (156aa)
Regulatory protein MarR n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I144_MYCRH
Regulatory protein MarR {ECO:0000313|EMBL:EHB53832.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
hypothetical protein
Displaying items 1-30 of 117 in total

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