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scnpilot_expt_750_p_scaffold_928

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_928_31
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33105..33749
DNA (645bp) protein (215aa)
alanine racemase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B76176
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:ERK72245.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 1
hypothetical protein
scnpilot_expt_750_p_scaffold_928_32
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33779..34237
DNA (459bp) protein (153aa)
cell division protein SepF n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289C90F
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
sepF; cell division protein
scnpilot_expt_750_p_scaffold_928_33
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34291..34596
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D4C40
YGGT family protein {ECO:0000313|EMBL:KJQ54891.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_928_34
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34708..35688
DNA (981bp) protein (327aa)
cell division protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288DCB8
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03120.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
cell division initiation protein
scnpilot_expt_750_p_scaffold_928_35
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35678..36265
DNA (588bp) protein (196aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
signal peptidase n=1 Tax=Agromyces italicus RepID=UPI0003B37F63
signal peptidase II
scnpilot_expt_750_p_scaffold_928_36
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36252..37172
DNA (921bp) protein (307aa)
rlu; ribosomal large subunit pseudouridine synthase (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" so
RNA pseudouridine synthase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B42773
scnpilot_expt_750_p_scaffold_928_37
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37220..40756
DNA (3537bp) protein (1179aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] id=7721210 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacte
DNA polymerase III subunit alpha
scnpilot_expt_750_p_scaffold_928_38
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40809..42125
DNA (1317bp) protein (439aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
histidinol dehydrogenase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035E5D52
histidinol dehydrogenase
scnpilot_expt_750_p_scaffold_928_39
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42153..42626
DNA (474bp) protein (158aa)
Transcriptional repressor NrdR n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=NRDR_CLAMS
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subs
scnpilot_expt_750_p_scaffold_928_40
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42628..43677
DNA (1050bp) protein (350aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
diguanylate cyclase n=1 Tax=Leifsonia sp. 109 RepID=UPI00037166A1
dihydroorotate dehydrogenase 2
scnpilot_expt_750_p_scaffold_928_41
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43652..44209)
DNA (558bp) protein (186aa)
hypothetical protein id=7721205 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR24045.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_928_42
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44230..45639
DNA (1410bp) protein (470aa)
Putative metallopeptidase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CS36_CLAM3
hypothetical protein
Putative metallopeptidase {ECO:0000313|EMBL:CAN01900.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michi
scnpilot_expt_750_p_scaffold_928_43
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45676..46047
DNA (372bp) protein (124aa)
hypothetical protein id=7721203 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EYT62286.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AK
hypothetical protein
scnpilot_expt_750_p_scaffold_928_44
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46086..46958
DNA (873bp) protein (291aa)
ctaC; putative cytochrome c oxidase subunit II (EC:1.9.3.1)
cytochrome C oxidase subunit II n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A163F
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:EAR24048.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_928_45
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46960..48639
DNA (1680bp) protein (560aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome C oxidase subunit I n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288E448
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:EAR24049.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_928_46
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48643..49059
DNA (417bp) protein (139aa)
Cytochrome c oxidase polypeptide 4 {ECO:0000256|PIRNR:PIRNR017385}; EC=1.9.3.1 {ECO:0000256|PIRNR:PIRNR017385};; Cytochrome aa3 subunit 4 {ECO:0000256|PIRNR:PIRNR017385}; Cytochrome c oxidase polypept
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00037FA342
hypothetical protein
scnpilot_expt_750_p_scaffold_928_47
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49125..49571
DNA (447bp) protein (149aa)
translation elongation factor P (EF-P) n=1 Tax=Ruania albidiflava RepID=UPI0003B43C58
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH34226.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
scnpilot_expt_750_p_scaffold_928_48
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49568..50218)
DNA (651bp) protein (217aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X755_NAKMY
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ACV76924.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (s
scnpilot_expt_750_p_scaffold_928_49
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50215..51627)
DNA (1413bp) protein (471aa)
Guanine deaminase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X756_NAKMY rbh
guanine deaminase rbh
Guanine deaminase {ECO:0000313|EMBL:ACV76925.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 /
scnpilot_expt_750_p_scaffold_928_50
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51712..52482
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F992_VERMA
Uncharacterized protein {ECO:0000313|EMBL:KFF60580.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
IclR family transcriptional regulator
scnpilot_expt_750_p_scaffold_928_51
Streptomyces sp. HCCB10043, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52569..54077
DNA (1509bp) protein (503aa)
4-hydroxyphenylacetate-3-hydroxylase (EC:1.14.14.9)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Streptomyces sp. HCCB10043 RepID=V6UB99_9ACTO
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:ESU47957.1}; TaxID=1396518 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HCCB1
scnpilot_expt_750_p_scaffold_928_52
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54074..55639
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PV24_9ACTO
p-cresol methylhydroxylase {ECO:0000313|EMBL:KDA05319.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
FAD linked oxidase domain-containing protein
scnpilot_expt_750_p_scaffold_928_53
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55703..57232)
DNA (1530bp) protein (510aa)
vaoA; Vanillyl-alcohol oxidase (EC:1.1.3.38)
FAD-linked oxidase n=1 Tax=Yaniella halotolerans RepID=UPI0003B6789C
Uncharacterized protein {ECO:0000313|EMBL:KJC65307.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
scnpilot_expt_750_p_scaffold_928_54
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57387..57944
DNA (558bp) protein (186aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E831_9MICO
Deaminase {ECO:0000313|EMBL:KHL12144.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
dihydrofolate reductase
scnpilot_expt_750_p_scaffold_928_55
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58023..58697)
DNA (675bp) protein (225aa)
Ubiquinol-cytochrome C reductase cytochrome B subunit n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKN5_9ACTN
Ubiquinol-cytochrome C reductase cytochrome B subunit {ECO:0000313|EMBL:EAR24052.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
qcrB; cytochrome b subunit of the bc complex
Displaying items 31-55 of 55 in total

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