ggKbase home page

scnpilot_expt_750_p_scaffold_487_5

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 4055..4375

Top 3 Functional Annotations

Value Algorithm Source
transcription factor WhiB n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B36336 similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 106.0
  • Bit_score: 191
  • Evalue 4.20e-46
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 104.0
  • Bit_score: 186
  • Evalue 1.40e-44
WhiB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 106.0
  • Bit_score: 183
  • Evalue 4.10e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leifsonia rubra → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCGAGCAGCATCCGCGGGTCCGTGCCCGGCGACTGGTTCGTCGATCCCGTCCGCCTCGGCGTGCCGGGCGTGCGGCGGCCGATCGAGGACGACGACGACAGCCCGCTCGCGTGGCAGGTCGACGCGCTCTGCGCGCAGACCGACCCGGAGGCGTTCTTCCCGGAGAAGGGCGGCTCGACCCGCGACGCGAAGCGGATCTGCACGTCCTGCGAGGTGAAGGCGCAGTGCCTCGAGTACGCCCTGCAGAACGACGAGCGCTTCGGCATCTGGGGCGGCCTCTCTGAGCGCGAGCGCCGGCGCCTGCGGCGGCGCGCCTGA
PROTEIN sequence
Length: 107
MASSIRGSVPGDWFVDPVRLGVPGVRRPIEDDDDSPLAWQVDALCAQTDPEAFFPEKGGSTRDAKRICTSCEVKAQCLEYALQNDERFGIWGGLSERERRRLRRRA*