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scnpilot_expt_750_p_scaffold_1978_12

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 13412..13888

Top 3 Functional Annotations

Value Algorithm Source
sdhD; succinate dehydrogenase hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit id=7719829 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 140.0
  • Bit_score: 197
  • Evalue 1.10e-47
Succinate dehydrogenase, membrane subunit {ECO:0000313|EMBL:EAR24183.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 132.0
  • Bit_score: 191
  • Evalue 1.10e-45
sdhD; succinate dehydrogenase, hydrophobic anchor subunit similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 145.0
  • Bit_score: 184
  • Evalue 2.80e-44

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCGCAGCAGAGCATCGGCAGCGTGCTGGTCCCGGCGCCCGGGACCAAGTACGAGCGCTACGCGCGGCGGCCGCGCCGCTTCAACCTCGAGAAGTGGGCCTGGATCTACATGCGCGCCTCCGGCGTGCTGCTCGCGGTCCTCATCTTCGGCCACCTGTTCGTCAACCTGGTCTCCGGCGAGGGCGTCAAGCAGATCGACTTCGCGTTCGTCGCCGGCAAGTGGGCCGACCCCTTCTGGATCGTCTGGGACGTCCTGCTGCTCTGGCTCGCCCTCATCCACGGCGCGAACGGCATGCGCACGCTCGTCAACGACTACGCGACCCGGCCGGCGCTGCGCCGCGTCCTGCTCGGCCTGATCGCCCTGGCGACCGTCGCCCTGCTCGTGCTCGGCACGCTCGTGCTGACCACCTTCGACCCGTGCCTCGGGGCGACGGCCGAGACGGCCGCCGCGATCCCGCAGTGCGCGATCAAGTGA
PROTEIN sequence
Length: 159
MAQQSIGSVLVPAPGTKYERYARRPRRFNLEKWAWIYMRASGVLLAVLIFGHLFVNLVSGEGVKQIDFAFVAGKWADPFWIVWDVLLLWLALIHGANGMRTLVNDYATRPALRRVLLGLIALATVALLVLGTLVLTTFDPCLGATAETAAAIPQCAIK*