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scnpilot_expt_750_bf_scaffold_1208_3

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_fragment

partial RP 6 / 55 BSCG 4 / 51 ASCG 2 / 38
Location: comp(990..1541)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH46_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 181.0
  • Bit_score: 275
  • Evalue 4.90e-71
sigma factor similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 180.0
  • Bit_score: 274
  • Evalue 3.10e-71
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC53593.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 180.0
  • Bit_score: 274
  • Evalue 9.00e-71

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Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GTGCGCGGGTCAGACAACGAATGGACCGACCTGATGCGGCAGGCCAATGCGGGTAATGATGCCGCCTACCATCGGCTGTTGAAGGCGGTGACCCCGGTTCTGAGAGCGGCCGCGCGCCGTGGTCTGACGCAAGCCGGACGGCCCGCCGACCAGTCCGAGGATATCGTGCAGGACATTTTGCTGGCCGTGCATCTGAAACGTCATACCTGGGACGAGAATGCGCCCTTCGCGCCGTGGCTGTTCGCGATTGCTCGCAACAAGCTGATCGATACGCTGCGCCGAGGTGGCCGGCGTGTTTTCGTCAATATCGATGATTTCTCGGACATCCTTCCGGGCGAGCAGCCGCAGGAGACGGTGTCCGGGACCGACGTTGCGGTGCATTTGAACGCCCTGCCGGCTCGCCAGCGCGAGGTGCTGCAATCGATTTCGGTCGATGGCCTGTCGATCCGGGACACCGCGACGCGGCTCGCGATGACGGAAGGCGCGGTGCGCGTCGCACTGCACCGGGGTCTTGCCAGCCTGTCGTCCCGCATGCAGGAAAAACAGCCATGA
PROTEIN sequence
Length: 184
VRGSDNEWTDLMRQANAGNDAAYHRLLKAVTPVLRAAARRGLTQAGRPADQSEDIVQDILLAVHLKRHTWDENAPFAPWLFAIARNKLIDTLRRGGRRVFVNIDDFSDILPGEQPQETVSGTDVAVHLNALPARQREVLQSISVDGLSIRDTATRLAMTEGAVRVALHRGLASLSSRMQEKQP*