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scnpilot_expt_750_bf_scaffold_1382_3

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: 1460..2221

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631E47 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 253.0
  • Bit_score: 404
  • Evalue 9.70e-110
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 2.30e-109
  • rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:AJP74498.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 1.10e-108

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGCATTGCAGGAGGAGGAGGCGCAACCGGCTGCAGCAACCGCCGCGGACCCGTTGACGCCGTCTCCCAAGGGTTCCGGCAGGCGCCTGCGCGGCGCGGTTGCCCATTATCTCGGCACGGCCATCGTTTCGGGCCGGATCGCGCCCGGCGAGCGGCTGACCGGCGAGGTTGCCAACTCCGAAGCGCTCGACGTGTCTCGAAGCGCCTATCGCGAGGCAGTACAGGTCCTCACTGCCAAGGGCCTGGTCGAGAGCCGCCCCAAGGCCGGCACGCGCGTATTGCCGCGCAGCAAGTGGAACATGCTCGATCCTGCGGTATTGGCATGGGCCTTCTCTGGAGAGCCCGACCTCGAATTCGTCCGCGATCTGTTCGAGCTTCGCGGGATCGTCGAGCCCAATGCCGCCCGGCTGGCAGCGGAACGCCGCGACAAGACCGATATCAAGGCGATGAAGGATGCGATCGGCAAGATGCGCCGCCACACGCTTGCGACCGAAGCCGGGCGCGCGGCGGACCGGGACTTCCATGACGCACTGCTCCGGGCGACGCACAACAGCACGCTCATCGCCCTGAGCGCGAGCATCGGCGCTGCGGTGAACTGGACCACCCAGTTCAAGCAGCGCGCCCGCGCGCTGCCTCGCGATCCGCTTCCGGACCATGTCCGCGTGTTCGACGCGATCGCCGCCGGCGATGGCGAGGCCGCGAGCCAGGCGATGCGCATACTCGTCGACCTCGCGCTCGAGGACACCCGCTCCGCGATGTAG
PROTEIN sequence
Length: 254
MALQEEEAQPAAATAADPLTPSPKGSGRRLRGAVAHYLGTAIVSGRIAPGERLTGEVANSEALDVSRSAYREAVQVLTAKGLVESRPKAGTRVLPRSKWNMLDPAVLAWAFSGEPDLEFVRDLFELRGIVEPNAARLAAERRDKTDIKAMKDAIGKMRRHTLATEAGRAADRDFHDALLRATHNSTLIALSASIGAAVNWTTQFKQRARALPRDPLPDHVRVFDAIAAGDGEAASQAMRILVDLALEDTRSAM*