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scnpilot_expt_750_bf_scaffold_1680_9

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: comp(5749..6591)

Top 3 Functional Annotations

Value Algorithm Source
sigma factor sigB regulation protein rsbQ n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003663F31 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 260.0
  • Bit_score: 391
  • Evalue 5.50e-106
  • rbh
Sigma factor sigB regulation protein rsbQ {ECO:0000313|EMBL:KGT79568.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 260.0
  • Bit_score: 370
  • Evalue 2.40e-99
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 260.0
  • Bit_score: 369
  • Evalue 6.30e-100

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGACAATATTCACTCGAGATGCGAACGGCATGATGCGTGATGCGCCAGATAGCCAGCGCACGCTCGATCGCCTGAATGTCAGGATAGGCGGAGCGGGGCACCGAACGATGGTATTCGCCCATGGCTACGGGTGCGACCAGAATATGTGGCGTCTCGTCGCGCCCGCATTCGAAAGTCAGTTTCGGACGGTGCTGTTCGATTATATCGGGGCGGGCGGATCCGATATCTCGGCATATGACGCTGATAAATATGGCTCGCTCGAAGGCTATGCCGACGACGTGATCGATCTGGCGGGCGCCCTCGGCATCACCGATGGCGTGTTTGTGGGTCACTCGGTGAGCGCGATGATCGGCTTGATCGTCGCGCGCCGCGCGCCCCATCTCTTCTCGACCTTGGTGCTGGTCGGCCCTTCACCCTGCTACATTGATTGCGGAGACTATGTGGGCGGGTTCAGCCGCGAGCAGATCGACGAGCTACTTGAGTTCCTCGACAGCAATCATCTGGGCTGGTCGCAGGCGATGGCACCCGTGATCATGGGCAATTCCGATCGGCCGGAATTGGGCGACGAGCTCACCGCCAGCTTCTGCCGCACCGATCCTGACATCGCGAAACGGTTCGGCCGCGTCACCTTCCTGACGGACAGCCGCGCCGAACTGGGCGCGGTAGATGCGCGCGTGCTGGTTCTCCAGTGCCGCGAGGACATCATCGCGCCGCCGTGCGTCGGCGATTTCGTCCAGCGAGCCATCCCCGGTAGCAGTCTGGTCACGCTCGATGCGACGGGTCATTGTCCCAACCTGAGTGCACCGGAAGCCACGATCGCGGCGATCGAAGCCTTTGTCTGA
PROTEIN sequence
Length: 281
MTIFTRDANGMMRDAPDSQRTLDRLNVRIGGAGHRTMVFAHGYGCDQNMWRLVAPAFESQFRTVLFDYIGAGGSDISAYDADKYGSLEGYADDVIDLAGALGITDGVFVGHSVSAMIGLIVARRAPHLFSTLVLVGPSPCYIDCGDYVGGFSREQIDELLEFLDSNHLGWSQAMAPVIMGNSDRPELGDELTASFCRTDPDIAKRFGRVTFLTDSRAELGAVDARVLVLQCREDIIAPPCVGDFVQRAIPGSSLVTLDATGHCPNLSAPEATIAAIEAFV*