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scnpilot_expt_750_bf_scaffold_2437_4

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: comp(1898..3265)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas melonis RepID=UPI000363486A similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 413.0
  • Bit_score: 673
  • Evalue 1.50e-190
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 410.0
  • Bit_score: 713
  • Evalue 2.90e-203
TonB-dependent receptor {ECO:0000313|EMBL:AJP73478.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 410.0
  • Bit_score: 713
  • Evalue 1.40e-202

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGTTCAAGCTCGGCATCTCGGGCGCCCGCCTCACCCGCGACGGCTTCGGCCGGAACCGCTATCTCGGGATCGACAATTACAACAAGAATGTCTGGGCCGGCCGGGCCACGCTGGAGTTCGAGACGCCCGACGAGAAGATGTCGGTGCGGATCACCGGCGACTATACCCATGACAAGTCGAACCCCCGCAACGGCCACCGCCTGATCCCGGGCCTGCTCACCGGCTCGCCGGTGCTGAGCAATGTCTTCGACACCAATGCCGGTCTCAACAGCCCGAAGAACGACGTCCAGGCGGGCGGCATCTCGATGACGGTCAATGCCGAGGTCAGCGACCTGATCACGCTGCGCAGCATCAGCGCCTATCGCGAGGACACGTCGTACACGCCGATCGACTTCGATTCGACGCCCTCGGTCGATGTCGACGTGCCGGCCTATTACAAGAACAACCAGACCAGCCAGGAATTCCAGGCGCTGATCCATGGCGGCAAGATCAACGGCATCCTGGGCTTCTACTATCTGGGCGCCAAGGCGACGACCGGCTTCGGCGTGCTGCTGTCGACCACCCTGCCCGGGTTCAACGCCTATACCGCCGGCGACGTGCGCACCGAGACCAGCTCGATCTATGGCGACTTCACCTTCGATTTCACGCCGCAGCTCAGCCTGACGCTCGGCGGCCGCTACACCTGGGACCAGCGCCGGAGCTATGTCTTCAAGGCGAGCTATTTCGGCCTGACGCCGGACTTTGGCGGCACCCCGATCCCGGTCGGCGCGCCGTCCACCGATTTCCGCGGCACCGCCAATTTCAAGCGCTTCACGCCGCGCGCCACCTTGAGCTTCAAGCCGAGCGCCGACCACATGGTCTATGCGTCCTATTCGGAAGGCTTCAAGGGCGGCGGCTTCGATCCGCGCGGTTCGGGCACGTCGGCGCCGATCAGCAACCCGTCGGCGGGCCGCACCTATCAGGATATCTACAATTACCTCTCCTTCGATCCGGAGACGGTGAAGAGCTATGAGATCGGCTGGAAGGGCGCCGCGTTCGATCGCCGCCTGAACTGGTCGCTCGCCGGCTTCTATTCGAACTATTCGAACGTCCAGATCCCGGGCTCGGTCGGCTGCCTGATCAACAATGTCCAGAGCTTCTGCGGCATCACCACCAACGCCGCCAAGGCCGACATCAAGGGCGTGGAACTCGAGACCAACGCCGTGCTGGCGCGCGGCTTTGCCGGCCCGGGACCGGCACCGATGTCGCCAATGTCCGCGTGTTCCAGAACACGCCGGACTGGACGCTGGCGGGCACGCTCGGCGCGGCGCTGCCGATCGGCGGCGGCGACCTCAACGCCACCACCACCGTGTCCTATCGCAGCCTGA
PROTEIN sequence
Length: 456
MFKLGISGARLTRDGFGRNRYLGIDNYNKNVWAGRATLEFETPDEKMSVRITGDYTHDKSNPRNGHRLIPGLLTGSPVLSNVFDTNAGLNSPKNDVQAGGISMTVNAEVSDLITLRSISAYREDTSYTPIDFDSTPSVDVDVPAYYKNNQTSQEFQALIHGGKINGILGFYYLGAKATTGFGVLLSTTLPGFNAYTAGDVRTETSSIYGDFTFDFTPQLSLTLGGRYTWDQRRSYVFKASYFGLTPDFGGTPIPVGAPSTDFRGTANFKRFTPRATLSFKPSADHMVYASYSEGFKGGGFDPRGSGTSAPISNPSAGRTYQDIYNYLSFDPETVKSYEIGWKGAAFDRRLNWSLAGFYSNYSNVQIPGSVGCLINNVQSFCGITTNAAKADIKGVELETNAVLARGFAGPGPAPMSPMSACSRTRRTGRWRARSARRCRSAAATSTPPPPCPIAA*