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scnpilot_expt_750_bf_scaffold_1745_5

Organism: SCNPILOT_EXPT_750_BF_Acidovorax_68_7_partial

near complete RP 47 / 55 MC: 11 BSCG 46 / 51 MC: 10 ASCG 13 / 38 MC: 9
Location: 4190..4687

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237868E similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 164.0
  • Bit_score: 232
  • Evalue 4.30e-58
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186}; Flags: Precursor;; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 164.0
  • Bit_score: 231
  • Evalue 7.90e-58
rare lipoprotein B similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 164.0
  • Bit_score: 227
  • Evalue 3.00e-57

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Taxonomy

Acidovorax sp. NO-1 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGACAGGCGCCGCCTTCTCCTCGCTGCGCCCGCGCTGCTGCTTGCCGGCTGCGGCTTCCGGTTGCGCGGGGTGCCGCAGTTCGCCTTCGGTTCGCTCTACATCGCGGCGCCGGAAGGCTCGCAGCTGGCGTTGCAATTGCGCCGCACGCTCGAAGCCACCGGCGGCGGCCTGCGCGTGCTCAGCGACCCGGCGGCGCTGCCCCAGGCCGAAGCGGTGTTCGAGCTGCTGGCCGAGCAGCAGGAGCGTTCGGTGGTCGGCCTCAACGCCTCGGGCCAGGCGCGCGAGCTGGAGCTGCGCCTGCGCATCCGCTTTCGCCTGCGCAATCAGGCCGGCAGCGAGCTCATCGCGCCGACCGAGATCGTGCAGCAGCGCGAGCTGAGCTACAACGAAACCCTGGCCCTGGCCAAGGAGGCCGAAGAGGCGCTGCTGTACCGCGACATGCGCCGCGACCTGGTGCAGCAGCTGGTGCGCCGGCTGGCGGCGGCCAGGCCGTAA
PROTEIN sequence
Length: 166
MDRRRLLLAAPALLLAGCGFRLRGVPQFAFGSLYIAAPEGSQLALQLRRTLEATGGGLRVLSDPAALPQAEAVFELLAEQQERSVVGLNASGQARELELRLRIRFRLRNQAGSELIAPTEIVQQRELSYNETLALAKEAEEALLYRDMRRDLVQQLVRRLAAARP*