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scnpilot_expt_750_bf_scaffold_1250_14

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(16701..17534)

Top 3 Functional Annotations

Value Algorithm Source
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA85_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 269.0
  • Bit_score: 448
  • Evalue 3.70e-123
  • rbh
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator {ECO:0000313|EMBL:EKS36525.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiac similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 269.0
  • Bit_score: 448
  • Evalue 5.30e-123
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 256.0
  • Bit_score: 220
  • Evalue 6.10e-55

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGACCACGCACGTCGGCGATCCATGGACTGACATTTCGCAATGGCCCACCGGCAGCGACACCTTCGTGGAGGCCTTTGCCAAAGGCCTCGCCGTCATTTCGGCGTTCAGTTATCAGCACAAGCTCAAGCTCGCCGATGTTGCCCGGCAGACAAAGCTGCCGCGCGCCGGTGTGCGCCGCATGCTGCACACTCTGGTTGCCCTCGGCATGGCGCGTCAGGATGGCGACGATTTCATGTTGACGCCGCGCGTGCTCCAACTGGGATTCTCGTACCTTTCGTCGCTGTCGCTGCGCGAAGTGGCGCAGCCGGTGATCGAAAGGCTGTCGCGCAAGGCAGATGAGGTGGTCGCCATCTCGGTGCTCGACGGGGCGGATGTTCTCTACATCGCGCGTGCGGAGGTGACGAGCGTGTTGCGGCGCGGACTGATCACCGGCAGCCGCATCCCTGCGTTCTGCACATCCATGGGGCGCGTGCTGCTCGCCGCCCTGCCCGAGGCCGAGTGCTCGGCCCTGCTCGCCAGTTCAGAACGACGTCAATGGACGCGCACAACCGTGACCGATGTCGAAAAGCTTGAACGCGAGATCGAGAAGGTGCGCAAGCAGGCGTGGAGCATGGTCGTAGAAGAGCTTGAACTCGGTGCGTTCGGCATGGCCGTTCCGATCTATGGCGCCAATGGCAGCACGGTCGCAGCGATCAACCTCTCGACAAATCGGGCGCGGCATTCTCCGAAAGTACTGTTCAAGGAATTCATGCCCGATTTGAAGGCTGCGTCAGACGAAATCTCTCAACACCTTATCGCGTACAAAACATCGTCTGATCGCACGCACCTTTAG
PROTEIN sequence
Length: 278
MTTHVGDPWTDISQWPTGSDTFVEAFAKGLAVISAFSYQHKLKLADVARQTKLPRAGVRRMLHTLVALGMARQDGDDFMLTPRVLQLGFSYLSSLSLREVAQPVIERLSRKADEVVAISVLDGADVLYIARAEVTSVLRRGLITGSRIPAFCTSMGRVLLAALPEAECSALLASSERRQWTRTTVTDVEKLEREIEKVRKQAWSMVVEELELGAFGMAVPIYGANGSTVAAINLSTNRARHSPKVLFKEFMPDLKAASDEISQHLIAYKTSSDRTHL*