ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_3558_7

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_6_partial

megabin RP 44 / 55 MC: 15 BSCG 44 / 51 MC: 12 ASCG 9 / 38 MC: 2
Location: comp(4877..6028)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YD09_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 383.0
  • Bit_score: 580
  • Evalue 1.10e-162
  • rbh
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 383.0
  • Bit_score: 594
  • Evalue 1.40e-166
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 383.0
  • Bit_score: 570
  • Evalue 3.30e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGCGGTTCATCTTCAAGACCGACTACGAGCAGGACATCAAGCTCTTCCAGCATGGCGGAGCATGGTGGTCCTATGGGCTGCTGTTCGCGGTGCTGGCCGTGGCGCCGTACCTCATCGGCAGCTATCTGCAGAGCCAGCTCGTCTTCGTCTTCATCTACGCGATCGTCGGCGTCGCGCTGATGATCCTTGTCGGCTTCACCGGCCAGGGCTCGATCGGGCACGCTGCCTTCCTCGCCATCGGCGCCTACACCGCGGCCTTTCTCCAGGCGCGCGGCTATCCCTTCGAGGTCTACTTCCCGGCTGCCGGCATCCTGACCGGCGTGGTCGGCGCCATCGTCGGCATCCCGGCATTGCGGCTGCACGGCATTTACCTGCTGATCGCGACGATCTCGTTCGCCTTCATCGTCCAGGAGGTGCTTGCGCGTTGGGAGAGCGTGACCCACGGCAATGAAGGCATGCGCGTGCGCGCCGTCGAGTTCTTCGGCCAGACGGTCTCGCGTGACAGCAATTCCTTCTACTTCCTCTGCCTCGGCATTCTGGTGCTGGTCATCATCGGGACGCTGAACCTCATGCGCTCGCCGACGGGTCGCGCGTTCATCGCCATCCGCGACAGCGAGACGGCGGCGAAGAGCATGGGCATCGATCTTGCGAAATACAAGGTGCGGTCATTCGCGATCAGCGCGGCGATCACCGGCCTCGCCGGCACGCTCTACGCCCACAAGATGTCGTTCATCAGCCCGGAGATGTTCACGCTCCTGCTGTCGATCGAATTCATCATGGTGATCATCATCGGCGGCGCTTTCGGGCTGCACGGCGCGATCCTCGGCGCGATCTTCATCGTCATGGTCGATCCGCTGATCACCATGCTCAAGGACGACCTGCCTGGCATGGTCGCAAGCCTCTCGCGCGGCTTTGGTGTCGGCGAGGAGGGCGCGCGAGCGGTCCAGGACCGGCTCTATGCGATCTTCTCGGCGCCGGGCCTCAAGGGCGCGATCTACGGCCTGATCATCATCATGTTCGTGCTGTTCGAGCCCATGGGCCTCTACGGGCGCTGGCTCAAGATCAAACTCTATTTCCAGCTCTTCCCTCTCTACAAGAAAGCGACCTTCAGGCGGCAGAAGACCTATGTGAAGTCGGAGCGCAACCGGTGA
PROTEIN sequence
Length: 384
MRFIFKTDYEQDIKLFQHGGAWWSYGLLFAVLAVAPYLIGSYLQSQLVFVFIYAIVGVALMILVGFTGQGSIGHAAFLAIGAYTAAFLQARGYPFEVYFPAAGILTGVVGAIVGIPALRLHGIYLLIATISFAFIVQEVLARWESVTHGNEGMRVRAVEFFGQTVSRDSNSFYFLCLGILVLVIIGTLNLMRSPTGRAFIAIRDSETAAKSMGIDLAKYKVRSFAISAAITGLAGTLYAHKMSFISPEMFTLLLSIEFIMVIIIGGAFGLHGAILGAIFIVMVDPLITMLKDDLPGMVASLSRGFGVGEEGARAVQDRLYAIFSAPGLKGAIYGLIIIMFVLFEPMGLYGRWLKIKLYFQLFPLYKKATFRRQKTYVKSERNR*