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scnpilot_expt_750_bf_scaffold_893_25

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment

partial RP 27 / 55 BSCG 27 / 51 MC: 3 ASCG 10 / 38
Location: comp(27019..27585)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=2 Tax=Rhodanobacter denitrificans RepID=M4NJC6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 188.0
  • Bit_score: 213
  • Evalue 1.40e-52
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 1.70e-53
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:AGG90207.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 8.70e-53

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGCTGGGGGCGCTGCTGCTGCAGCCCGCCCTGGCCAGGAAGGATGACCGCAGCCAGCCGATGCGGGTGGTGCATGCCGATTCGTTCAGCGGCTTCAATGCACCCAACAGCGTCACCACGCTCAACGGCCACGTCGAGCTGAGCCAGGGCACGCTGCGGATCACCGGCGCCCTGGCCAAGATCTACGTCGACGGCAACCAGCAGCTGAGCCGCATCGTGGTCACCGGCAACGCCCACATCCAGCAACTGGACGATGCCGGCAACCTGATGTCCGGCGACGCGCGCACGCTGGACTACGACAACATCAAGGGCATCGCCACGCTCAAGGGCCAGGCCGCGGTGCACCAGCAAGGTCGCGGCGAAGCCCATGGCGACACCCTCACCTACAACACGCAGACCAGCGAGATGACCGGCAGCAGCGGCAACGACGGCATGGTGCACATGATTTTCCTGCCCAAGCCGCAGCCTGCTACCGCGCACTCCGCCACCATCCCTCCCGCCCCCGCGTCTTCCGCCGCGGCGCCGGCCGCCGCGGCCAGCAGCCCGGCGCCGCAGGGGCAACACTGA
PROTEIN sequence
Length: 189
VLGALLLQPALARKDDRSQPMRVVHADSFSGFNAPNSVTTLNGHVELSQGTLRITGALAKIYVDGNQQLSRIVVTGNAHIQQLDDAGNLMSGDARTLDYDNIKGIATLKGQAAVHQQGRGEAHGDTLTYNTQTSEMTGSSGNDGMVHMIFLPKPQPATAHSATIPPAPASSAAAPAAAASSPAPQGQH*