ggKbase home page

scnpilot_expt_750_bf_scaffold_1135_5

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment

partial RP 27 / 55 BSCG 27 / 51 MC: 3 ASCG 10 / 38
Location: 5547..6923

Top 3 Functional Annotations

Value Algorithm Source
Type IV / VI secretion system protein, DotU family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 458.0
  • Bit_score: 775
  • Evalue 3.80e-221
  • rbh
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:EIL93075.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 458.0
  • Bit_score: 775
  • Evalue 5.30e-221
membrane protein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 456.0
  • Bit_score: 576
  • Evalue 9.50e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGAGCAGCAATGGTCCCCACGACGACGATCCGCAGCAGGACCGGACCATAGTCCGCCCGCGCGGCGCACCTGCACCGGCTGCGCCGACCCCCGCGCCCGCTCCTGTTCCCGCAGCGCTTCCCGCCACCCGGCCGACTGCCGCGCCGGCACGGCCGGCGGCGGGTCACGCACAGGTTCCCGCGGCCGCAATCGGCGATTTCCTGGGTGCCGGGCTCAATACCCTGGTTCAGGCGGCCAGCCCCTTGCTGCTGTTGTCGGTGCAGTTGCGCAACAGCGCGTCACAGCCCGACGCGGCGCGCCTGCGCGAGCAGGTCATCGCCCAGGTGCGCCAGTTCGAGAGCAACGCGCAAGCCGCCGGCATTGCGGCGCAAACCATCACCGCCGCGCGTTACGTGCTGTGCACCACGCTCGACGAGGCGGTGATGAACACGCCGTGGGGCGGGCAGAGCGGCTGGGCGGCCAAGACGCTGCTGGTGGCCTTCCACGGCGAATCGTACGGTGGCGAGAAGTTCTTCCTGATCCTGGATCGCCTGTGCGCGGATTTCTCGCGCCACATCGACCTGATCGAACTGATGTACATCTGCCTCACGCTCGGTTTCGGCGGGCGTTACCAGATCGAGGCCGACGGCCGCGCCAAGCTGGCCGACATCCAGGAGGAGCTCTACCGGCGCATCAAGGCGCAGCGTCCGCCGGCGGCGGACGAACTGGCACCGCACTGGAAGGGCATCGAGGACCGGCGCAACCCGCTGGTGCGCTACGTGCCACTGTGGGTGATCGTGGCGGCCGGCGCCTGCATCCTGCTGGGCGCGTTCCTGTACTTCTACACCCGCCTGAACGAGTTGTCCTCGCCGGTCAGCGCGCAGGTGGCGCAGATCGGCTTGCGCAGCGCAGTGCCGCCGGACGAGTCGCGGCTGCGCCAGACCCAGCCCAAGGTCGAGCGCAAGAGTCTCAAGCAGTTGCTGGCGCCGCAGGAGCAGGCCGGCGCGCTGACCGTGGAGGAGAAGCCCGACGGCTCGGCGCTGGTGCGGCTCGATGCACCGGCGATGTTCGCCTCCGGCGGTACCGAGGTGACAGCGCGGCAGATCCCGATGCTGCACGCGATCACCGCGGCGCTGAACCAGGTACCGGGCCGGGTGGTGGTGGTTGGCCATACCGACGACCAGCCGGTTCACTCGCTGAAGTTCAAGGACAACTACGCGTTGTCGGCGGCGCGCGCGCGTTCCGTGGTGCAGATCCTCAGCGAGGGCATCGACAACGCCGGGCGGCTCGAATCCAGCGGTGCCGGTTCGTCGCAGCCGATCGCGCTGCCGCCGGACCTGCCAGCCAACCGGGCGCGCAACCGTCGCGTCGAAATTCTCTACAGCCCGGAGGACTGA
PROTEIN sequence
Length: 459
MSSNGPHDDDPQQDRTIVRPRGAPAPAAPTPAPAPVPAALPATRPTAAPARPAAGHAQVPAAAIGDFLGAGLNTLVQAASPLLLLSVQLRNSASQPDAARLREQVIAQVRQFESNAQAAGIAAQTITAARYVLCTTLDEAVMNTPWGGQSGWAAKTLLVAFHGESYGGEKFFLILDRLCADFSRHIDLIELMYICLTLGFGGRYQIEADGRAKLADIQEELYRRIKAQRPPAADELAPHWKGIEDRRNPLVRYVPLWVIVAAGACILLGAFLYFYTRLNELSSPVSAQVAQIGLRSAVPPDESRLRQTQPKVERKSLKQLLAPQEQAGALTVEEKPDGSALVRLDAPAMFASGGTEVTARQIPMLHAITAALNQVPGRVVVVGHTDDQPVHSLKFKDNYALSAARARSVVQILSEGIDNAGRLESSGAGSSQPIALPPDLPANRARNRRVEILYSPED*