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scnpilot_expt_750_bf_scaffold_1135_7

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment

partial RP 27 / 55 BSCG 27 / 51 MC: 3 ASCG 10 / 38
Location: 10461..12032

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion-associated protein, BMA_A0400 family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 558.0
  • Bit_score: 586
  • Evalue 3.70e-164
  • rbh
Type VI secretion-associated protein, BMA_A0400 family {ECO:0000313|EMBL:EIL93077.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 558.0
  • Bit_score: 584
  • Evalue 1.50e-163
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 574.0
  • Bit_score: 297
  • Evalue 5.70e-78

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
GTGCCGTCCGCGGCCGCAGGCTTCTTCGGCAAGCTGCCCTGCGCGGGAGACTTCGTGCAGCGACGGCTGCCGGCCAGCTTCGTCGATGCCTGGGACCGGCACTTCGAGACAGCCGTGGCGCACAGCCGCGACGCGTTGGGCGATACCTGGCACGAGGCGTTCCACGCCAGCCCGGCGTGGCGTTTCGCACTCGCGCCGGGCGTATGCGGCGAGGCGGCGTGGGTTGGCGTCATGGGGCCGGGCGCCGATCGCGTGGGTCGCTGTTTTCCGATGGTGATCGCTGCGCCGCTCTCCGACGTTGCTGCAGCCATCGGCGATGGCGCGGAATGGTTCGAACGCGCCGAGCAGTTGCACCGCGCGGCGCAGGCCGATGCGGGCATCGGCGTGGACGACTTCGACGCGCAGGTCGCGGCCCTGGGCAGCCCGCTCGATGCCGGCCAGACGCGGCCCGATCCGTGGCGTGAGGTGGACTGGACAGCGGCCAGCCACTGGCGCCTGCCGTTGCCTGCGCATGGCGGTGCGACAGCCTTGGCTGATCTGTGGAAGCGCCTCGGCGCCGTCCCCGGGCGCTGGTGTCTGTGGTGGACCGATGGCGCGGGGCGCGTCCCGGCCAGTGTGCTGGCGACCGATGGCTTGCCCGGCGCCGAGGCTTACGCCGGCTTGCTCGACGCCGGGCAGGGCACGGCCGCGTGGCAGACGCTGGGCAGCTTCGAGCTTGCAACTCCGCGCGCAACCGCGCCACTGACGATGGACGCGCCACCACCGGTGGCCTCCATCAACTCCTGGCTGCCGGACGATCTCGACCTGCTTGCCGACCTGGGCGGCAGCTCGCCCGCCGCATCCACGGCCATGCCGCTCGGCGACGTGACCCTCGCGGCGGATGTCGCCGCGGCAGCGAACACGCCGGTCGCCGCCCTCGCCGTGCTGCAACGGCCGGAGGTGGGCCTGAGCCTGGTCGCCGCCGAGGTCGGCGTGGCCGATCCGCGCCAGCAGGCCGTGGCGGCAGTGGCGGCGATTGCCGGCGACATGCTCGGCGCCGAACTGATCGGCGGCATGCAGGTGCTGCGCACGCGCATCATGGCGTTGAACCCGCAACTGCGGCAGTTCGGCGAGGATCTCGTCGACCCGGTGCCGGAGGATTGCGCGGTGATCGCCGCGCACGTGGCCGACGGCCAGGCCGCATTGCTGCGTATCGGCGCGGCGGCAGGCTGGCATTGGCGGCACGGCCGGCTGCAACCGTTCTTCGCGCGCAGCGATGCGCCACCGGCCGCCAGCGCGAGCAACAGCAGCGACGACCTCGACGACCTGCTGTTCAGTCCCGTGTCGCTGGCTGCGCCCGGCCTGGGCGCGACCGCGCAGCCGACTTGCGGCGAAGTCAGCTGCGCGCTGCAGGCCGGCGACCGGCTGCTGCTGATGGCCTCGCACCCCTTGCTGCAGCTGCCGCCGGACTTGCTGGCGCGCAGCCTGGCCGCAGGCACCTGCAGCGAGGCGCGCGCACGCATCGCGGCGGCTGCCGGACTGGGCGCCAGTCCCGACCACTGGCCGTTGGCGGTCATTGAGGTGCACGCATGA
PROTEIN sequence
Length: 524
VPSAAAGFFGKLPCAGDFVQRRLPASFVDAWDRHFETAVAHSRDALGDTWHEAFHASPAWRFALAPGVCGEAAWVGVMGPGADRVGRCFPMVIAAPLSDVAAAIGDGAEWFERAEQLHRAAQADAGIGVDDFDAQVAALGSPLDAGQTRPDPWREVDWTAASHWRLPLPAHGGATALADLWKRLGAVPGRWCLWWTDGAGRVPASVLATDGLPGAEAYAGLLDAGQGTAAWQTLGSFELATPRATAPLTMDAPPPVASINSWLPDDLDLLADLGGSSPAASTAMPLGDVTLAADVAAAANTPVAALAVLQRPEVGLSLVAAEVGVADPRQQAVAAVAAIAGDMLGAELIGGMQVLRTRIMALNPQLRQFGEDLVDPVPEDCAVIAAHVADGQAALLRIGAAAGWHWRHGRLQPFFARSDAPPAASASNSSDDLDDLLFSPVSLAAPGLGATAQPTCGEVSCALQAGDRLLLMASHPLLQLPPDLLARSLAAGTCSEARARIAAAAGLGASPDHWPLAVIEVHA*