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scnpilot_expt_750_bf_scaffold_1995_13

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment

partial RP 27 / 55 BSCG 27 / 51 MC: 3 ASCG 10 / 38
Location: 13243..13428

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ82_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 61.0
  • Bit_score: 101
  • Evalue 3.30e-19
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 61.0
  • Bit_score: 102
  • Evalue 4.10e-20
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:AEA23932.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 61.0
  • Bit_score: 102
  • Evalue 2.00e-19

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 186
GTGCCCGCGGGCGGGTTCGCGTTCCGCCGCGAGGACACCGACCTGGTCGCCGCCTTCGACGCCGGGCTGAGCGCCGCGCAGACCTCCGGCGACTGGCTGAAAGCCGCGTCGCCCTTCGGGTTCAGCGCCGCGAACCTCCCGCCCGCGGAGCTGACGACGACGGCCCTCTGCACGGGCACGGCCTGA
PROTEIN sequence
Length: 62
VPAGGFAFRREDTDLVAAFDAGLSAAQTSGDWLKAASPFGFSAANLPPAELTTTALCTGTA*