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scnpilot_expt_750_bf_scaffold_974_8

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_69_7_fragment

partial RP 6 / 55 BSCG 8 / 51 MC: 2 ASCG 4 / 38
Location: 6875..7606

Top 3 Functional Annotations

Value Algorithm Source
23S RNA-specific pseudouridylate synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 237.0
  • Bit_score: 398
  • Evalue 1.40e-108
Pseudouridine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 231.0
  • Bit_score: 427
  • Evalue 7.90e-117
  • rbh
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:EIM02441.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 231.0
  • Bit_score: 427
  • Evalue 1.10e-116

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCTCGACATCCTCCACCAGGACGACGCCCTGATCGCGGTGAACAAGCCCGCAGGCCTGCCCGTGCACCGCTCGGCGATGGTGAACGACGCCGAGCAATACCTGGTGGACGTGCTGCGCGAGCAGGTGGGCGGCAACGTCTACCTCGCGCACCGCCTCGACCGCGCCACCAGCGGCGTGCTGCTGGTGGCGCGCAGCAGCGAGGTCGCCGCCGCGCTGGGCGAGCAGTTCATGGGCCGCGACGTGCGCAAGCAATACCTCGTGGTGGTGCGCGGCTGGCCGGAGCCGGGCGAGGGCATGGTCGACTATCCGCTGCCCGGCTCGCGCGAGACCGGCCCGCGCCGCGATGCACGCACGCGCTACCGGACGCTCGCCACGACGGAAGTGCCGATCGCGCTGGGCCGCTATCCGCAGCAGCGCTACGCCCTGCTGCTGGCCGTACCGGAAACCGGCCGCTTCCGCCAGATCCGCAAGCACCTCGCCCACATCCACCATCCGGTGATCGGCGACTGCCAGCACGGCCGTGGCGACCACAACCGCCTCTACAAGCAGCACTTCGGCTGCCACCGCATGCTGCTGCATGCGTGGCGGCTGGATTTCCGGCACCCGGCGAGCGGCGAGGCGATGACGCTGGAGGCGCCGCTGGACGGCGAGTACGGCGCACTGCTGGAACGCTTCGGCTGGGTGCTGCCCGGCAACACGCCAGACAACACCCTGCCCCGTTCGTCCTGA
PROTEIN sequence
Length: 244
MLDILHQDDALIAVNKPAGLPVHRSAMVNDAEQYLVDVLREQVGGNVYLAHRLDRATSGVLLVARSSEVAAALGEQFMGRDVRKQYLVVVRGWPEPGEGMVDYPLPGSRETGPRRDARTRYRTLATTEVPIALGRYPQQRYALLLAVPETGRFRQIRKHLAHIHHPVIGDCQHGRGDHNRLYKQHFGCHRMLLHAWRLDFRHPASGEAMTLEAPLDGEYGALLERFGWVLPGNTPDNTLPRSS*